DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp1 and Ppid

DIOPT Version :10

Sequence 1:NP_523366.2 Gene:Cyp1 / 32595 FlyBaseID:FBgn0004432 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_001004279.1 Gene:Ppid / 361967 RGDID:1303174 Length:370 Species:Rattus norvegicus


Alignment Length:180 Identity:105/180 - (58%)
Similarity:124/180 - (68%) Gaps:10/180 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 SKASKMSTL--PRVFFDMTADNEPLGRIVMELRSDVVPKTAENFRALCTGEKGFG--------YK 112
            |.|.|.|..  ||||||:....|.:||||:||.:|:|||||||||||||||||.|        :|
  Rat     5 SPAGKPSNSKNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGPTTGKPLHFK 69

  Fly   113 GSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFPDENFELKHTGSGILSMANAGANTNGSQFFI 177
            |..|||:|..||.|||||:|.|||||:||||.||.||||..||...|:|||||||.|||||||||
  Rat    70 GCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFI 134

  Fly   178 CTVKTAWLDNKHVVFGEVVEGLDVVKKIESYGSQSGKTSKKIIVANSGSL 227
            .||.|..||.||||||:|::||.|.:.:|:......|.:|..::|..|.|
  Rat   135 TTVPTPHLDGKHVVFGQVIKGLGVARMLENVEVNGEKPAKLCVIAECGEL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp1NP_523366.2 cyclophilin_ABH_like 67..225 CDD:238907 99/165 (60%)
PpidNP_001004279.1 cyclophilin_ABH_like 16..182 CDD:238907 99/165 (60%)
Chaperone activity. /evidence=ECO:0000250 185..215 105/180 (58%)
TPR 213..>367 CDD:440225
Interaction with HSP90AB1. /evidence=ECO:0000250 214..370
TPR repeat 223..251 CDD:276809
TPR repeat 272..302 CDD:276809
TPR repeat 307..335 CDD:276809
TPR repeat 341..364 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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