DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp1 and Ranbp2

DIOPT Version :9

Sequence 1:NP_523366.2 Gene:Cyp1 / 32595 FlyBaseID:FBgn0004432 Length:227 Species:Drosophila melanogaster
Sequence 2:XP_038954525.1 Gene:Ranbp2 / 294429 RGDID:1560047 Length:3114 Species:Rattus norvegicus


Alignment Length:212 Identity:122/212 - (57%)
Similarity:147/212 - (69%) Gaps:9/212 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 AAAFQIAESAILANKSITLASSACSVNRGQLQFG-IQIVREYSKASKMSTLPRVFFDMTADNEPL 80
            |..|:..|......|.|    ..|..|..:||.| :.:..|.||    .|.|.||||:..|.|||
  Rat  2911 AVRFKTKEITECFKKKI----EECQQNIMKLQNGQVSLAAELSK----ETNPVVFFDVCVDGEPL 2967

  Fly    81 GRIVMELRSDVVPKTAENFRALCTGEKGFGYKGSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNK 145
            |||:|||.|::||:||||||||||||||||:|.||||||:|:|:|||||.|.:|||||:||||:|
  Rat  2968 GRIIMELFSNIVPQTAENFRALCTGEKGFGFKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGDK 3032

  Fly   146 FPDENFELKHTGSGILSMANAGANTNGSQFFICTVKTAWLDNKHVVFGEVVEGLDVVKKIESYGS 210
            |.||||:|||||.|:|||||.|.|||.|||||...|...||.||||||.|.:|:|.|:||||:||
  Rat  3033 FDDENFDLKHTGPGLLSMANCGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIESFGS 3097

  Fly   211 QSGKTSKKIIVANSGSL 227
            ..|..|::|.:...|.|
  Rat  3098 PKGSVSRRICITECGQL 3114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp1NP_523366.2 cyclophilin_ABH_like 67..225 CDD:238907 106/157 (68%)
Ranbp2XP_038954525.1 TPR <18..126 CDD:223533
TPR repeat 59..89 CDD:276809
RanBD1_RanBP2-like 1180..1296 CDD:270203
zf-RanBP 1345..1374 CDD:395516
RanBP2-type Zn finger 1350..1369 CDD:275375
zf-RanBP 1410..1438 CDD:395516
RanBP2-type Zn finger 1414..1433 CDD:275375
zf-RanBP 1473..1502 CDD:395516
RanBP2-type Zn finger 1477..1496 CDD:275375
zf-RanBP 1533..1563 CDD:395516
RanBP2-type Zn finger 1537..1556 CDD:275375
zf-RanBP 1596..1625 CDD:395516
RanBP2-type Zn finger 1600..1619 CDD:275375
zf-RanBP 1655..1683 CDD:395516
RanBP2-type Zn finger 1659..1678 CDD:275375
RanBD2_RanBP2-like 1902..2018 CDD:269998
RanBD3_RanBP2-like 2199..2315 CDD:270204
IR1-M 2529..2590 CDD:403422
IR1-M 2605..2663 CDD:403422
RanBD4_RanBP2-like 2815..2931 CDD:269999 5/23 (22%)
cyclophilin_ABH_like 2954..3112 CDD:238907 106/157 (68%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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