DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp1 and Ranbp2

DIOPT Version :9

Sequence 1:NP_523366.2 Gene:Cyp1 / 32595 FlyBaseID:FBgn0004432 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_035370.2 Gene:Ranbp2 / 19386 MGIID:894323 Length:3053 Species:Mus musculus


Alignment Length:189 Identity:118/189 - (62%)
Similarity:141/189 - (74%) Gaps:5/189 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 CSVNRGQLQFG-IQIVREYSKASKMSTLPRVFFDMTADNEPLGRIVMELRSDVVPKTAENFRALC 103
            |..|..:||.| ..:..|.||    .|.|.||||:.||.||||||:|||.|::||:|||||||||
Mouse  2869 CQQNIIKLQNGHTSLAAELSK----DTNPVVFFDVCADGEPLGRIIMELFSNIVPQTAENFRALC 2929

  Fly   104 TGEKGFGYKGSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFPDENFELKHTGSGILSMANAGA 168
            |||||||:|.||||||:|:|:|||||.|.:|||||:||||:||.||||:|||||.|:|||||.|.
Mouse  2930 TGEKGFGFKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGDKFDDENFDLKHTGPGLLSMANYGQ 2994

  Fly   169 NTNGSQFFICTVKTAWLDNKHVVFGEVVEGLDVVKKIESYGSQSGKTSKKIIVANSGSL 227
            |||.|||||...|...||.||||||.|.:|:|.|:||||:||..|..|::|.:...|.|
Mouse  2995 NTNSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIESFGSPKGSVSRRICITECGQL 3053

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Cyp1NP_523366.2 cyclophilin_ABH_like 67..225 CDD:238907 107/157 (68%)
Ranbp2NP_035370.2 TPR 1 26..59
TPR_11 59..126 CDD:290150
TPR repeat 59..89 CDD:276809
TPR 2 60..93
TPR_1 60..92 CDD:278916
TPR 3 94..128
TPR 4 165..201
TPR 5 288..319
TPR 6 583..616
TPR 7 648..681
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 773..802
RCR <839..925 CDD:304939
20 X 2 AA repeats of F-G. /evidence=ECO:0000305 1000..3035 111/169 (66%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1147..1171
RanBD1_RanBP2-like 1180..1296 CDD:270203
zf-RanBP 1345..1374 CDD:279035
RanBP2-type Zn finger 1350..1369 CDD:275375
zf-RanBP 1410..1438 CDD:279035
RanBP2-type Zn finger 1414..1433 CDD:275375
zf-RanBP 1469..1498 CDD:279035
RanBP2-type Zn finger 1473..1492 CDD:275375
zf-RanBP 1499..1524 CDD:279035
RanBP2-type Zn finger 1502..1521 CDD:275375
zf-RanBP 1558..1587 CDD:279035
RanBP2-type Zn finger 1562..1581 CDD:275375
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1587..1609
zf-RanBP 1617..1645 CDD:279035
RanBP2-type Zn finger 1621..1640 CDD:275375
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1648..1675
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1744..1772
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1819..1846
RanBD2_RanBP2-like 1864..1980 CDD:269998
Interaction with BICD2. /evidence=ECO:0000250|UniProtKB:P49792 1984..2124
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2030..2060
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2111..2144
RanBD3_RanBP2-like 2161..2277 CDD:270204
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2316..2348
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2394..2430
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2443..2463
IR1-M 2468..2529 CDD:288995
Interaction with sumoylated RANGAP1. /evidence=ECO:0000250 2468..2472
2 X 50 AA approximate repeats 2470..2596
Required for E3 SUMO-ligase activity. /evidence=ECO:0000250 2470..2545
Interaction with UBE2I. /evidence=ECO:0000250 2470..2522
Interaction with SUMO1. /evidence=ECO:0000250 2523..2596
IR1-M 2544..2602 CDD:288995
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2598..2666