DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp1 and cyn-1

DIOPT Version :10

Sequence 1:NP_523366.2 Gene:Cyp1 / 32595 FlyBaseID:FBgn0004432 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_506561.1 Gene:cyn-1 / 179936 WormBaseID:WBGene00000877 Length:192 Species:Caenorhabditis elegans


Alignment Length:171 Identity:116/171 - (67%)
Similarity:133/171 - (77%) Gaps:7/171 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 STLPRVFFDMTADNEPLGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIP 121
            |..|:||||::...||.||:.|||.:|||||||||||||||||||.|       :|||.|||:||
 Worm    19 SQRPKVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIP 83

  Fly   122 NFMCQGGDFTNHNGTGGKSIYGNKFPDENFELKHTGSGILSMANAGANTNGSQFFICTVKTAWLD 186
            .||.||||||.||||||:|||||||.||||:|||||.|.|||||||.||||||||||||.|.|||
 Worm    84 EFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLD 148

  Fly   187 NKHVVFGEVVEGLDVVKKIESYGSQSGKTSKKIIVANSGSL 227
            ..|||||:|.:|:.||||||..||:||..:|.:.:|:.|.|
 Worm   149 GGHVVFGQVTDGMSVVKKIEKMGSRSGAPAKTVTIADCGEL 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp1NP_523366.2 cyclophilin_ABH_like 67..225 CDD:238907 113/164 (69%)
cyn-1NP_506561.1 cyclophilin_ABH_like 22..187 CDD:238907 113/164 (69%)

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