DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp1 and cyn-2

DIOPT Version :10

Sequence 1:NP_523366.2 Gene:Cyp1 / 32595 FlyBaseID:FBgn0004432 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_499828.1 Gene:cyn-2 / 176807 WormBaseID:WBGene00000878 Length:172 Species:Caenorhabditis elegans


Alignment Length:171 Identity:113/171 - (66%)
Similarity:133/171 - (77%) Gaps:9/171 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LPR--VFFDMTADNEPLGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIP 121
            :||  ||||:|...:..|||||||.:|:|||||||||||||||||.|       :|||.|||:||
 Worm     1 MPRVKVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIP 65

  Fly   122 NFMCQGGDFTNHNGTGGKSIYGNKFPDENFELKHTGSGILSMANAGANTNGSQFFICTVKTAWLD 186
            .||.||||||..|||||:||:|.||.||||:.||||.|:|||||.||||||||||:|||||.|||
 Worm    66 EFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLD 130

  Fly   187 NKHVVFGEVVEGLDVVKKIESYGSQSGKTSKKIIVANSGSL 227
            .||||||:|:||:||||.|||.||:.|..|...::|:.|.:
 Worm   131 GKHVVFGKVIEGMDVVKAIESKGSEDGAPSAPCVIADCGEM 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp1NP_523366.2 cyclophilin_ABH_like 67..225 CDD:238907 112/166 (67%)
cyn-2NP_499828.1 cyclophilin_ABH_like 5..169 CDD:238907 110/163 (67%)

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