DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp1 and cyn-6

DIOPT Version :10

Sequence 1:NP_523366.2 Gene:Cyp1 / 32595 FlyBaseID:FBgn0004432 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_497257.1 Gene:cyn-6 / 175231 WormBaseID:WBGene00000882 Length:201 Species:Caenorhabditis elegans


Alignment Length:187 Identity:97/187 - (51%)
Similarity:132/187 - (70%) Gaps:1/187 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VNRGQLQFGIQIVREYSKASKMSTLPRVFFDMTADNEPLGRIVMELRSDVVPKTAENFRALCTGE 106
            ::|..|.|.:.|:...::|.......:|||||.....|:|:||:.|..:|||||.:||..|....
 Worm     1 MSRALLFFVLAILALSAEARGPRVTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFVELAQRA 65

  Fly   107 KGFGYKGSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFPDENFELKHTGSGILSMANAGANTN 171
            :|.||.||.|||||.|||.||||||..:||||:||||.:|.||||:|:|.|.|.|||||||.:||
 Worm    66 EGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGWLSMANAGEDTN 130

  Fly   172 GSQFFICTVKTAWLDNKHVVFGEVVEGLDVVKKIESYGSQSG-KTSKKIIVANSGSL 227
            ||||||.|.||:|||.||||||:::||:|||::||:....:| :..:.:::||:|.:
 Worm   131 GSQFFITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAGDRPIEDVVIANAGHI 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp1NP_523366.2 cyclophilin_ABH_like 67..225 CDD:238907 91/158 (58%)
cyn-6NP_497257.1 cyclophilin 26..185 CDD:469651 91/158 (58%)

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