DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp1 and cyn-15

DIOPT Version :10

Sequence 1:NP_523366.2 Gene:Cyp1 / 32595 FlyBaseID:FBgn0004432 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_493378.1 Gene:cyn-15 / 173225 WormBaseID:WBGene00000891 Length:629 Species:Caenorhabditis elegans


Alignment Length:143 Identity:66/143 - (46%)
Similarity:84/143 - (58%) Gaps:8/143 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 GRIVMELRSDVVPKTAENFRALCTGEKGFGYKGSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNK 145
            |.|.:.|..|..|||.|||   ||..:...|.|..|||||.:||.|.|| .:..||||:||:|..
 Worm   483 GDITIRLFGDECPKTVENF---CTHSRRGYYNGLTFHRVIKSFMIQTGD-PSGKGTGGESIWGED 543

  Fly   146 FPDE-NFELKHTGSGILSMANA-GANTNGSQFFICTVKTAWLDNKHVVFGEVVEGLDVVKKIESY 208
            |.|| :..|:|.....:||||| |.|||||||||......|||.|:.:||||..|:.||::|...
 Worm   544 FEDEFHPRLRHDKPFKVSMANAGGGNTNGSQFFITVCPADWLDGKNTLFGEVTAGMSVVQRINQV 608

  Fly   209 GS--QSGKTSKKI 219
            .:  :||:..:.|
 Worm   609 STFERSGRPRESI 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp1NP_523366.2 cyclophilin_ABH_like 67..225 CDD:238907 66/143 (46%)
cyn-15NP_493378.1 WD40 53..>285 CDD:475233
WD40 repeat 101..142 CDD:293791
WD40 repeat 150..185 CDD:293791
WD40 repeat 192..237 CDD:293791
cyclophilin 477..626 CDD:469651 66/143 (46%)
Blue background indicates that the domain is not in the aligned region.

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