DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SWIP and Washc4

DIOPT Version :10

Sequence 1:NP_573116.2 Gene:SWIP / 32594 FlyBaseID:FBgn0030739 Length:1102 Species:Drosophila melanogaster
Sequence 2:XP_036011700.1 Gene:Washc4 / 319277 MGIID:2441787 Length:1218 Species:Mus musculus


Alignment Length:1189 Identity:313/1189 - (26%)
Similarity:558/1189 - (46%) Gaps:211/1189 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AEDILRDYGSFISEHDGKLKLLRDKVPNRDVSESAQCVYMSPVVEVNFMGNDSMAPDRSFEESEL 67
            ||..|::||.|:.|:..:|:.:.|.:.  |:........:.|:..       .:.|   :|:|.|
Mouse   114 AEVQLKNYGRFLEEYTSQLRRIEDALD--DLIGDVWDFNLDPIAL-------KLLP---YEQSSL 166

  Fly    68 ---------VANKPLTTLANLCNQCRNLSRKAK-RFQLAFLFSDFRLDDTLPPHTHTSEGSAGLE 122
                     |.||.:|..|.||.:.:.|..:|: :|....||           :...:..|:.:|
Mouse   167 LELIKTENKVLNKVITVYAALCCEIKKLKYEAETKFYNGLLF-----------YGEGATDSSMVE 220

  Fly   123 GSL-VRMSSSMDFFCQVYFLLNRMIVILQNLWRQIAA---SVSVPMDINE---VHIFAVFDAMSE 180
            |.. ::|...:.|..::...:.|...::.|:..|:||   |..:...|.|   ||...:::.:.|
Mouse   221 GDCQIQMGRFVSFLQELSCFVTRCYEVVMNVIHQLAALYISNKIGPKIIETTGVHFQTMYEHLGE 285

  Fly   181 LLEHIVVFNELA-NQSKISTMWALYKKWLMNLSNSQS----ANLELNGLSTSLMDIENLITKDFF 240
            ||..::..:|:. |...:...|.:||:.|.::.::.|    ...:|......|:.:|..      
Mouse   286 LLTVLLTLDEIVDNHVTLKDHWTMYKRLLKSVHHNPSKFGIQEEKLKPFEKFLLKLEGQ------ 344

  Fly   241 RILLDNLME---LKKQF-GLNSVSPITQHSN--AYIRRQLLDVDANPSNELKNYEDPKHIIRLTT 299
              |||.::.   :::|| .||....::::|.  ......:..:.||...:|   .:|..|.:...
Mouse   345 --LLDGMIFQACIEQQFDSLNGGISVSKNSTFAEEFAHSIRSIFANVEAKL---GEPSEIDQRDK 404

  Fly   300 FV-----VVVH-ELGIQMEGKLVKNVIDLVARHKQVPLNRSVFWSPSGFLSLH-----AKTLMKS 353
            :|     .|:| ::...::.|..|:::|:..:...:.|..::.|.|..|| :|     ||.|.:.
Mouse   405 YVGICGLFVLHFQIFRTVDKKFYKSLLDICKKVPAITLTANIIWFPDNFL-IHKMPAAAKLLDRK 468

  Fly   354 SARSQDGQGPKVH-STVLEKFRLSDQRTCRQLGVQLSLWSIQMQRVFD----VGVFGH-LKTFLQ 412
            |.     |..|:| .|.|::...|..:..:...|.:|.|.::|:.:..    :..|.. |.....
Mouse   469 SL-----QAIKIHRDTFLQQKAQSLNKDVQSYYVFVSSWMMKMESMLSKEQRMDTFAEDLTNRCN 528

  Fly   413 LILNGHSYADQVNLLAVALINRHVALMTPMTRNDWIVVSRLLQYLKVIQKTFESNQINFVRFISS 477
            :.:.|..||..::.:....:|.::::..|||:.....:.||::.||.|:..|....:.....:|.
Mouse   529 VFIQGFLYAYSISTIIKTTMNLYMSMQKPMTKTSVKALCRLIELLKAIEHMFYRRSMVVADSVSH 593

  Fly   478 LIQWQKQKVIHLLHTTKKKIVV-LKLLQRKINFLATIKLAEKSIMGFPSKQRLTFVNLALG---- 537
            :.|..:.:.:..:...||:::. .|..:::::.|:.:.|||.::.|..:|||...|:|||.    
Mouse   594 ITQHLQHQALSSISVAKKRVISDKKYSEQRLDVLSALVLAENTLNGPSTKQRRLIVSLALSVGTQ 658

  Fly   538 --EFLDNRLLPADNQKLIKSILHRVNSISDIMRNIGGQLNTSESSSLVYNHW-------FLDTSV 593
              .|.|..|.|      ::.::.:::.||::...:..|.:      ..:.:|       :|| .|
Mouse   659 MKTFKDEELFP------LQVVMKKLDLISELRERVQAQCD------CCFLYWHRAVFPIYLD-DV 710

  Fly   594 LKEYTELQRNPY---SLQNLVSV---SHHLD-----------KIMAMFRGSRCPKQSANDLIIEF 641
            .:...:..|..|   :|::.|..   |.||:           :||.:.          |:.:::.
Mouse   711 YENAVDAARLHYMFSALRDCVPAMMHSRHLESHELLLDCYDKEIMDIL----------NEHLLDK 765

  Fly   642 LSNHLEFFLRVEALSHLFQSQDQPFQQSALDYRLCINAVAVENDGDYNIIKDHLENYFTATFYNL 706
            |...:|..||:...:||......||:....|..|..:...:.....:..|:.::.:|...|||||
Mouse   766 LCKEIEKDLRLSVHTHLKLDDRNPFKVGRKDLALFFSLNPIRFFNRFIDIRAYVTHYLDKTFYNL 830

  Fly   707 TTIAPHDWKSYEKMRHLANKVLQLQPIDDHLPNQIIDQGIDVLQIMRNIHTFASSYAYNMNLQVF 771
            ||:|.|||.:|.:||:||.:...|...:.|||:|.::||:|||:||||||.|.|.|.||:|.|:|
Mouse   831 TTVALHDWATYSEMRNLATQRYGLVMTEAHLPSQTLEQGLDVLEIMRNIHIFVSRYLYNLNNQIF 895

  Fly   772 VETNSRSKHLDIIGTRHVANSVQTHGTGIINTTVNFIYQFLRQKFYTFSTFLHDEQIKSRLLKEL 836
            :|..|.:|||:.|..||:|||::||||||:|||                                
Mouse   896 IERTSNNKHLNTINIRHIANSIRTHGTGIMNTT-------------------------------- 928

  Fly   837 RFHTEHKHSKSYQSYPYERADSFLKKIRRLGCSSNGETYMDLFRKVITQVGNAVGYVRLLQAGSK 901
                          ||::||:.|.:.||:||.:..|::|:|.||::|:|:|||:||:|::::|..
Mouse   929 --------------YPFDRAEKFNRGIRKLGITPEGQSYLDQFRQLISQIGNAMGYIRMIRSGGL 979

  Fly   902 NANFRNRSYKTRFDSNFS---CGGSKVHEATEGSIREYEKSLGHMKECYSD-------STNYFKL 956
            :.:    |...||..:..   .....|.|  ||...|..::..|:....||       .|.|||:
Mouse   980 HCS----SNAIRFVPDLEDIVSFEELVKE--EGLAEETLRAARHLDSVLSDHTRNSAEGTEYFKM 1038

  Fly   957 LLQGFQPFLCNPHNHHLRTFYLITPALIMNYIDYRVKQKLKIYKKDQTKISLFEDGFAIGLVYIL 1021
            |:..|.|....|.|.|||.||:|.|.|.:|::::.:..|.|:.||::...:..:||||:|:.|.|
Mouse  1039 LVDVFAPEFRRPKNIHLRNFYIIVPPLTLNFVEHSISCKEKLNKKNKLGAAFTDDGFAMGVAYTL 1103

  Fly  1022 NMLNQQTEFHELGWSQTITQHLNAERSK-VRDI--LAGQQRTAPEQLDEKLHQTVAITERHVNAY 1083
            .:|:|..||..|.|.|::       |.| :::|  :|.||.......||||.||:.:|::.:..|
Mouse  1104 KLLDQYQEFDSLHWFQSV-------REKYIKEIRAVAKQQNVQSTSQDEKLLQTMNLTQKRLEVY 1161

  Fly  1084 EHEYNLLYATLSSSEIFFQ 1102
            ..|:.|||.:|||:.|||:
Mouse  1162 LQEFELLYFSLSSARIFFR 1180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SWIPNP_573116.2 WASH-4_N 11..573 CDD:434178 128/613 (21%)
WASH-7_mid 582..910 CDD:434177 109/351 (31%)
WASH-7_C 929..1102 CDD:464293 65/182 (36%)
Washc4XP_036011700.1 WASH-4_N 122..690 CDD:434178 128/613 (21%)
WASH-7_mid 695..994 CDD:434177 112/359 (31%)
WASH-7_C 1011..1180 CDD:464293 62/175 (35%)

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