DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Had1 and fadB

DIOPT Version :10

Sequence 1:NP_573114.2 Gene:Had1 / 32592 FlyBaseID:FBgn0286508 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_418288.1 Gene:fadB / 948336 ECOCYCID:EG10279 Length:729 Species:Escherichia coli


Alignment Length:304 Identity:82/304 - (26%)
Similarity:134/304 - (44%) Gaps:39/304 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EKVGIVGSGLIGRSWSMLFASVGYQVVLYDILPEQVSTALTATQKELQDLEAKGLLRGK---LTA 67
            ::..::|:|::|...:...|..|..||:.||..:.::..:|...|.|.    |.|.|||   |..
E. coli   314 KQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLLN----KQLERGKIDGLKL 374

  Fly    68 AQQFACISGTNDLKELVKGAIFVQECIPERLDLKKALYKQLDAVVGPNTILSSSTSTFLPSLFSA 132
            |...:.|..|.|.....:..|.| |.:.|...:|||:..:.:..|..:|:|:|:|||...|..:.
E. coli   375 AGVISTIHPTLDYAGFDRVDIVV-EAVVENPKVKKAVLAETEQKVRQDTVLASNTSTIPISELAN 438

  Fly   133 DLKNKANVLVSHPVNPPYYVPLVEIVPAPWTKPEWVKKTRALMEEIGQKPVTLSREIEGFALNRI 197
            .|:...|....|..||.:.:|||||:....:..|.:.|..|...::|:.|:.:: :..||.:||:
E. coli   439 ALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVN-DCPGFFVNRV 502

  Fly   198 QYAILNETWRLVEAGILNVKDIDSVMSN----GLGPRYAF--LGPLETAHLNAEGMANYFER--- 253
            .:.......:|:..| .:.:.||.||..    .:||.|..  :| ::|||.....||..|.:   
E. coli   503 LFPYFAGFSQLLRDG-ADFRKIDKVMEKQFGWPMGPAYLLDVVG-IDTAHHAQAVMAAGFPQRMQ 565

  Fly   254 --YSNTIYAV-----------------SETMGPTPKMEGPVAVE 278
              |.:.|.|:                 .|.....||.|...|||
E. coli   566 KDYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKPKKEEDAAVE 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Had1NP_573114.2 PRK06129 7..310 CDD:235706 82/303 (27%)
fadBNP_418288.1 fadB 1..715 CDD:183293 82/304 (27%)

Return to query results.
Submit another query.