DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Had1 and cryl1

DIOPT Version :9

Sequence 1:NP_001285320.1 Gene:Had1 / 32592 FlyBaseID:FBgn0286508 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_001120498.1 Gene:cryl1 / 100145620 XenbaseID:XB-GENE-945577 Length:319 Species:Xenopus tropicalis


Alignment Length:308 Identity:161/308 - (52%)
Similarity:219/308 - (71%) Gaps:2/308 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IVGSGLIGRSWSMLFASVGYQVVLYDILPEQVSTALTATQKELQDLEAKGLLRGKLTAAQQFACI 74
            |||||||||||:|:|||.|::|.||||:.|||||||...:|::::|:...:|||.|:...|.|.|
 Frog    11 IVGSGLIGRSWAMVFASGGFRVKLYDIVQEQVSTALEDIRKQMEELKKSEMLRGALSMEDQMALI 75

  Fly    75 SGTNDLKELVKGAIFVQECIPERLDLKKALYKQLDAVVGPNTILSSSTSTFLPSLFSADLKNKAN 139
            ||..|||..:.||.::|||:||.||||:.::.:||..|..:||:|||||...|:.....|::..|
 Frog    76 SGCTDLKYALHGAQYIQECVPENLDLKRKIFSELDLYVDDSTIISSSTSCLSPTSMFTGLQHVKN 140

  Fly   140 VLVSHPVNPPYYVPLVEIVPAPWTKPEWVKKTRALMEEIGQKPVTLSREIEGFALNRIQYAILNE 204
            .:|:|||||||||||||:||.|.|:...|::|..||:::||.||.|.:|::||.|||:|||:::|
 Frog   141 CIVAHPVNPPYYVPLVELVPHPQTEMATVERTYNLMKKVGQSPVKLMKEMDGFVLNRLQYAVISE 205

  Fly   205 TWRLVEAGILNVKDIDSVMSNGLGPRYAFLGPLETAHLNAEGMANYFERYSNTIYAVSETMGPTP 269
            .||||:.|:::.:|:|.|||.|||.|||||||||||||||||..:|.|||...|..|..|.||.|
 Frog   206 AWRLVQDGVISPRDVDLVMSEGLGMRYAFLGPLETAHLNAEGFKSYCERYGEGIKRVLATFGPVP 270

  Fly   270 KMEGPVAVEVAKQLGEMV--PLDQLAQRRNYRDNCLTQLSILKNKLNQ 315
            ..||.||.::.:.|.|.|  ..|||...|.||:.||:.|:.||.::.:
 Frog   271 DFEGEVAEKIDQALWEDVRDKADQLKAGREYRNTCLSHLAKLKKEMKK 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Had1NP_001285320.1 PRK06129 7..310 CDD:235706 159/301 (53%)
3HCDH_N 7..183 CDD:280833 90/172 (52%)
3HCDH 191..>265 CDD:279114 45/73 (62%)
cryl1NP_001120498.1 PRK06129 7..314 CDD:235706 160/302 (53%)
3HCDH_N 8..184 CDD:280833 90/172 (52%)
3HCDH 192..>261 CDD:279114 44/68 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 188 1.000 Domainoid score I3253
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H9322
Inparanoid 1 1.050 312 1.000 Inparanoid score I2543
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D462830at33208
OrthoFinder 1 1.000 - - FOG0006346
OrthoInspector 1 1.000 - - otm47797
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4620
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

Return to query results.
Submit another query.