DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3632 and MTM2

DIOPT Version :9

Sequence 1:NP_001096996.1 Gene:CG3632 / 32589 FlyBaseID:FBgn0030735 Length:1250 Species:Drosophila melanogaster
Sequence 2:NP_196074.2 Gene:MTM2 / 830333 AraportID:AT5G04540 Length:833 Species:Arabidopsis thaliana


Alignment Length:851 Identity:234/851 - (27%)
Similarity:333/851 - (39%) Gaps:264/851 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 TDD-GILALSNYRI-FLSKQSTGYETYVPLGLIESVQVRDLFQLI-------------------- 100
            ||: |.|.|||:|| |||:   |....||||.|..|.:....:|.                    
plant    68 TDEAGTLLLSNFRILFLSE---GTRKLVPLGTIPFVAIEKFNKLAPKVQSNKYHNNENAPTRLLQ 129

  Fly   101 VNCKDASTVRCSF-PSAEQCSDWQRRIHLMIGV------PESLETLFAFPFYSWTCDVLGSGNGS 158
            |..||...|...| |..:|       .|.::..      ||.:..|:||     ||.....||.:
plant   130 VTGKDMRIVVYGFRPGTKQ-------RHTVVDTLLRCNKPERVWDLYAF-----TCGPSQFGNTN 182

  Fly   159 GIVSAQANGNGLIAKDRCLTLHNGLAKPTANVTASNPLPDPASETISAAMSNRLQRSVRYESDFK 223
                         .|:|.|..:..|...::...:.|.:.|.     |..:||.|           
plant   183 -------------PKERLLNEYFRLLGKSSQRASMNMIEDG-----SFTLSNDL----------- 218

  Fly   224 NEVARLGFDLKGSWRISTANADFKLCPSYPPKLLVPCCITDEMLHNVANFRGSRRLPAVVWRHQK 288
                         |||:..|:::.||.|||..|:||..|:||.|...:.||...|||.:.|.|..
plant   219 -------------WRITNLNSNYDLCQSYPFALMVPKSISDEELLQTSTFRARCRLPVISWCHPG 270

  Fly   289 SGAILARCSQPEVG-WLGWRNTRDEQLLKALADACAFDRGEHARHSTCANAKAQPTKGSKETNGQ 352
            |||::||.|||.|| .:..|:..||:|   :|..|.    :.|.|           ||::     
plant   271 SGAVIARSSQPLVGLMMNMRSNSDEKL---VASFCT----QLAGH-----------KGAR----- 312

  Fly   353 SGLSGKSSPSLDDSSHEELTLDEIKKILIVDARSYTSAVTNRARGGGCECIEYYPCAEIEFMNLG 417
                                    :|:.|||||...:|:.|.|:|||.|....|..:||.|:.:.
plant   313 ------------------------RKLYIVDARPRKNALANGAKGGGSESSSNYLQSEIVFLGID 353

  Fly   418 NIHAIRKSFHAVRQLC----ASSPDDPN---------WYGQLEKTM-----------WMQHLSGL 458
            ||||:|:||..:|...    .:|.|..:         |.|....:|           |:.|:..:
plant   354 NIHAMRESFSRLRDYLDMHGTTSSDGTSSFLRHGGWTWGGGNLSSMSASVSVLGDSGWLSHIQSI 418

  Fly   459 LGATMTVVHTIEKNGRPVLVHCSDGWDRTPQIVATAQLCLDPYYRTVEGFRVLVEREWLNFGHKF 523
            |.....:...:......||||||||||||.|:|:.|.|.|||||||..||:.|||::||:|||.|
plant   419 LAGVAWIAARVAMESASVLVHCSDGWDRTTQLVSLACLLLDPYYRTFSGFQALVEKDWLSFGHPF 483

  Fly   524 ADRSGNGPNSDE--------------------------------------VNERCPVFLQWLDLV 550
            :||.|. ||..|                                      :|...|:||||||.:
plant   484 SDRVGM-PNVSESGNFELPIQSSSARSFPSSPVRQSPGSAAAQSSSSSYGLNNYSPIFLQWLDCI 547

  Fly   551 HQIHRQYPCSFEFSISYLIKLAQHSLSCLFGTFLCNSLRERIENSVFDRTFSVWPFLAET----- 610
            .|:.|.||.:||||.::|:......|||.||.|||||.:||.:..:.:....:|.:||:.     
plant   548 SQLMRMYPSAFEFSPTFLVDFIDCLLSCRFGNFLCNSEKERQQCGISETCGCIWAYLADLRSSSG 612

  Fly   611 ---MYRNPLYKHE------------TEKVLWPAHSVRFLYFWSDVYLGSLGNKNGTDLPLLSNER 660
               ::.||.|...            ....|||...:|    |:              .|:..|..
plant   613 TSHVHCNPFYDPSRYDGPLLPPAAALAPTLWPQFHLR----WA--------------CPVEPNVT 659

  Fly   661 QSGHNGLMAKTRSSEDLTTNELGQSTISRRSSDPNLTVESIVTDCFNANSNSMFDIRSEANNSVS 725
            ::.........:.||.....|..:..:...||    .:||:..:..|..     ||...|..|..
plant   660 ETEDQCRAMTVKYSEMKKEKEEAERKVDELSS----AMESLNEELLNER-----DISRAARESAK 715

  Fly   726 ENVQESVKDSKEVEL-----------DVTDATEVGP--CGRSNNPIPDFHNDQSTASKRDILE-V 776
            ...:|....|:.|:.           |.|...|.||  |..|   ||...::.:|.   |:.| :
plant   716 RATKERAVISRAVQSLGCKVKFTRNGDCTVEVEDGPQKCSHS---IPQKQSEDNTT---DVSESI 774

  Fly   777 ESQTQR 782
            .|.|::
plant   775 SSVTEQ 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3632NP_001096996.1 PH-like 35..147 CDD:302622 33/117 (28%)
Myotub-related 221..590 CDD:284109 143/431 (33%)
FYVE_MTMR4 1162..1221 CDD:277272
MTM2NP_196074.2 GRAM 49..108 CDD:214725 19/42 (45%)
Myotub-related 168..587 CDD:284109 160/513 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10807
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.