DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3632 and mtm1

DIOPT Version :9

Sequence 1:NP_001096996.1 Gene:CG3632 / 32589 FlyBaseID:FBgn0030735 Length:1250 Species:Drosophila melanogaster
Sequence 2:NP_001015828.1 Gene:mtm1 / 548545 XenbaseID:XB-GENE-1002030 Length:602 Species:Xenopus tropicalis


Alignment Length:604 Identity:179/604 - (29%)
Similarity:277/604 - (45%) Gaps:147/604 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GILALSNYRIFLSKQSTGYET------YVPLGLIESVQV--------RDLFQLIVNCKDASTVRC 111
            |.:.::||:::..    |.|.      .||||:|..::.        .:.:.|.:.|||...:|.
 Frog    60 GRIHVTNYKLYFK----GEEMEPLISFSVPLGVIARIEKMGGASSRGENSYGLDITCKDMRNLRF 120

  Fly   112 SFPSAEQCSDWQRRIHLMIGVPESLETLFAFPFYSWTCDVLGSGNGSGIVSAQANGNGLIAKDRC 176
            :.         ::.:|....:.|.| |.:|||                                 
 Frog   121 AL---------KQEVHSRKQIFEDL-TKYAFP--------------------------------- 142

  Fly   177 LTLHNGLAKPTANVTASNPLPDPASETISAAMSNRLQRSVRYES------DFKNEVARLGFDLKG 235
              |.:||                        :....|...::..      |...|..|.|.. .|
 Frog   143 --LSHGL------------------------LLFAFQNEEKFPENGWAVYDAMTEFRRQGLP-NG 180

  Fly   236 SWRISTANADFKLCPSYPPKLLVPCCITDEMLHNVANFRGSRRLPAVVWRHQKSGAILARCSQPE 300
            .|||:..|.:::||.:|||.|:||...::|.|..||.||...|:|.:.|.|.::.:.:.|||||.
 Frog   181 QWRITFINKNYELCDTYPPLLVVPYSASEEDLKKVAAFRSRNRIPVLSWLHPENQSAIMRCSQPL 245

  Fly   301 VGWLGWRNTRDEQLLKALADACAFDRGEHARHSTCANAKAQPTKGSKETNGQSGLSGKSSPSLDD 365
            ||..|.||..||:.|..:.|                            ||||:            
 Frog   246 VGMSGKRNKDDERYLDIIRD----------------------------TNGQT------------ 270

  Fly   366 SSHEELTLDEIKKILIVDARSYTSAVTNRARGGGCECIEYYPCAEIEFMNLGNIHAIRKSFHAVR 430
                       .|:.|.|||...:||.|:|.|||.|..:.||.||:.|:::.|||.:|:|...::
 Frog   271 -----------SKLTIYDARPNVNAVANKATGGGYESEDAYPNAELVFLDIHNIHVMRESLKKLK 324

  Fly   431 QLCASSPDDPNWYGQLEKTMWMQHLSGLLGATMTVVHTIEKNGRPVLVHCSDGWDRTPQIVATAQ 495
            .:...:.::.:|...||.|.|::|:..:|...:.|...:......|:||||||||||.|:.:.|.
 Frog   325 DIVYPNVEESHWLSSLESTHWLEHIKLVLTGAIQVADKVASGKSSVVVHCSDGWDRTAQLTSLAM 389

  Fly   496 LCLDPYYRTVEGFRVLVEREWLNFGHKFADRSGNGPNSDEVNERCPVFLQWLDLVHQIHRQYPCS 560
            |.||.||||:.||.|||::||::|||||:.|.|:|..:....:|.|:|||::|.|.|:.:|:|.:
 Frog   390 LMLDSYYRTIVGFEVLVQKEWISFGHKFSSRIGHGDKNHADADRSPIFLQFIDCVWQMSKQFPTA 454

  Fly   561 FEFSISYLIKLAQHSLSCLFGTFLCNSLRERIENSVFDRTFSVWPFLA--ETMYRNPLYKHETEK 623
            |||:..:||.:..|..||.|||||.|....|.:..|.::|.|:|..::  ::.|.||.|..|..:
 Frog   455 FEFNEHFLITVLDHLYSCRFGTFLYNCENIRDKEKVREKTQSLWSLISSEKSKYTNPFYTKELNR 519

  Fly   624 VLWPAHSVRFLYFWSDVYL 642
            ||:|..|:|.|..|.:.|:
 Frog   520 VLYPVASMRHLELWVNYYI 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3632NP_001096996.1 PH-like 35..147 CDD:302622 22/99 (22%)
Myotub-related 221..590 CDD:284109 135/368 (37%)
FYVE_MTMR4 1162..1221 CDD:277272
mtm1NP_001015828.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
PH-like 43..142 CDD:388408 20/95 (21%)
Myotub-related 150..485 CDD:368997 136/386 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 574..602
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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