DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3632 and MTMR12

DIOPT Version :9

Sequence 1:NP_001096996.1 Gene:CG3632 / 32589 FlyBaseID:FBgn0030735 Length:1250 Species:Drosophila melanogaster
Sequence 2:NP_001035536.1 Gene:MTMR12 / 54545 HGNCID:18191 Length:747 Species:Homo sapiens


Alignment Length:755 Identity:158/755 - (20%)
Similarity:275/755 - (36%) Gaps:241/755 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SPPPS-ICFIRAAESY--PKSQMEKEDSQLFVPFQELAGES---IKYL----------GR---TD 59
            :|.|| :.::|..|.:  .|...|||.:...:|.::|..|:   :||:          ||   ||
Human    15 APKPSFVSYVRPEEIHTNEKEVTEKEVTLHLLPGEQLLCEASTVLKYVQEDSCQHGVYGRLVCTD 79

  Fly    60 DGILALSNYRIFLSKQSTGY------ETYVPLGLIESV------QVRDLF--------QLIVNCK 104
            ..|..|.:....|....|.:      |..:.|..::.:      :.:.||        :||::||
Human    80 FKIAFLGDDESALDNDETQFKNKVIGENDITLHCVDQIYGVFDEKKKTLFGQLKKYPEKLIIHCK 144

  Fly   105 DASTVR-C-SFPSAEQCSDWQRRIHLMIGV------PESLETLFAFPFYSWTCDVLGSGNGSGIV 161
            |....: | .:...|:..      .::.|:      |:.|:.||.|.:                 
Human   145 DLRVFQFCLRYTKEEEVK------RIVSGIIHHTQAPKLLKRLFLFSY----------------- 186

  Fly   162 SAQANGNGLIAKDRCLTLHNGLAKPTANVTASNPLPDPASETISAAMSNRLQRSVRYESDFKNEV 226
                                      |....:|.:.||.:.|:   |.:.|:       |:..|:
Human   187 --------------------------ATAAQNNTVTDPKNHTV---MFDTLK-------DWCWEL 215

  Fly   227 ARLGFDLKGSWRISTANADFKLCPSYPPKLLVPCCITDEMLHNVANFRGSRRLPAVVWRHQKSGA 291
            .|...::|  ::..:.|..:|:|...|...:||..:.:|   ||..|:| ..:|...|......|
Human   216 ERTKGNMK--YKAVSVNEGYKVCERLPAYFVVPTPLPEE---NVQRFQG-HGIPIWCWSCHNGSA 274

  Fly   292 ILARCSQPEVGWLGWRNTRDE---QLLKALADACAFDRGEHARHSTCANAKAQPTKGSKETNGQS 353
            :|...:.|:        .:|:   |:.|:..|..         :.|......:..|         
Human   275 LLKMSALPK--------EQDDGILQIQKSFLDGI---------YKTIHRPPYEIVK--------- 313

  Fly   354 GLSGKSSPSLDDSSHEELTLDEI-------KKILIVDARSYTSAVTNRARGGGCECIEYYPCAEI 411
                     .:|.|...|:|.||       |::.::|..:                         
Human   314 ---------TEDLSSNFLSLQEIQTAYSKFKQLFLIDNST------------------------- 344

  Fly   412 EFMNLGNIHAIRKSFHAVRQLCASSPDDPNWYGQLEKTMWMQHLSGLLGATMTVVHTIEKNGRPV 476
            ||.:                      .|..|:..||.:.|:..:...|...:.:...:|.....|
Human   345 EFWD----------------------TDIKWFSLLESSSWLDIIRRCLKKAIEITECMEAQNMNV 387

  Fly   477 LVHCSDGWDRTPQIVATAQLCLDPYYRTVEGFRVLVEREWLNFGHKFADRSGNGPNSDEVNERCP 541
            |:...:..|....|.:..||.:||:.||..||:.|:::||:..||.|.||..:...:|:  |..|
Human   388 LLLEENASDLCCLISSLVQLMMDPHCRTRIGFQSLIQKEWVMGGHCFLDRCNHLRQNDK--EEVP 450

  Fly   542 VFLQWLDLVHQIHRQYPCSFEFSISYLIKLAQHSLSCLFGTFLCNSLRERIEN------------ 594
            |||.:||.|.|:..|:|.:|||:.:||..|:......:|.||..||..::..|            
Human   451 VFLLFLDCVWQLVHQHPPAFEFTETYLTVLSDSLYIPIFSTFFFNSPHQKDTNMGREGQDTQSKP 515

  Fly   595 ----SVFDRTFSVWPFLAETMYRNPLYKHETEKVLWPAHSVRFLYFWSDVYLGSLGNKNGTDLPL 655
                :|:|.:....| .|:|:.:||||..:.:........:||.:            :....|| 
Human   516 LNLLTVWDWSVQFEP-KAQTLLKNPLYVEKPKLDKGQRKGMRFKH------------QRQLSLP- 566

  Fly   656 LSNERQSGHNGLMAKTRSSEDLTTNELGQSTISR--RSSD 693
            |:..:.|...|...:  .::.|..|.||: .||:  .|||
Human   567 LTQSKSSPKRGFFRE--ETDHLIKNLLGK-RISKLINSSD 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3632NP_001096996.1 PH-like 35..147 CDD:302622 32/155 (21%)
Myotub-related 221..590 CDD:284109 86/378 (23%)
FYVE_MTMR4 1162..1221 CDD:277272
MTMR12NP_001035536.1 PH-like 26..202 CDD:327399 39/224 (17%)
PTPc 228..496 CDD:328744 80/355 (23%)
Interaction with MTM1. /evidence=ECO:0000269|PubMed:12847286 449..558 32/109 (29%)
3-PAP 563..686 CDD:315286 14/45 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155564
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.