DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3632 and Mtmr12

DIOPT Version :9

Sequence 1:NP_001096996.1 Gene:CG3632 / 32589 FlyBaseID:FBgn0030735 Length:1250 Species:Drosophila melanogaster
Sequence 2:XP_006232108.1 Gene:Mtmr12 / 310155 RGDID:1307902 Length:748 Species:Rattus norvegicus


Alignment Length:792 Identity:165/792 - (20%)
Similarity:283/792 - (35%) Gaps:281/792 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SPPPS-ICFIRAAESY--PKSQMEKEDSQL-FVPFQELAGES---IKYLGRTDD------GILAL 65
            :|.|| :.::|..|.:  .|...|||:..| .:|.::|..|:   :||: :.|.      |.|..
  Rat    15 APKPSFVSYVRPEEIHTNEKEVTEKEEVTLHLLPGEQLLCEASTVLKYV-QEDSCQLGICGRLVC 78

  Fly    66 SNYRI-FLSKQST----GYETY----------VPLGLIESV------QVRDLF--------QLIV 101
            :::|| ||..:.:    |.||:          :||..::.:      :.:.||        :|::
  Rat    79 TDFRISFLGDEGSAVDNGAETHFKNKIIGVNDIPLHCVDQIYGVFDEKKKPLFGQLKKYPEKLVI 143

  Fly   102 NCKDASTVR-C-SFPSAEQCSDWQRRIHLMIGV------PESLETLFAFPFYSWTCDVLGSGNGS 158
            :|||...:. | .:...|:..      .::.|:      |:.|:.||.|.:              
  Rat   144 HCKDLRVLHFCLRYTKEEEVK------RIVSGIIHHTQSPKLLKRLFLFSY-------------- 188

  Fly   159 GIVSAQANGNGLIAKDRCLTLHNGLAKPTANVTASNPLPDPASETISAAMSNRLQRSVRYESDFK 223
                             ...:|...|.| .|.|.....|                      .|:.
  Rat   189 -----------------AAAVHGTAADP-RNCTVMFDTP----------------------KDWC 213

  Fly   224 NEVARLGFDLKGSWRIST--ANADFKLCPSYPPKLLVPCCITDEMLHNVANFRGSRRLPAVVWRH 286
            .|:.|    .|||.:..|  .|..:::|...|...:||..:.::   :|..|:| |.:|...|..
  Rat   214 WELER----TKGSVKYKTVSVNEGYRVCDRLPAYFVVPTPLLED---DVKRFQG-RGIPIWCWSC 270

  Fly   287 QKSGAILARCSQPEVGWLGWRNTRDE---QLLKALADACAFDRGEHARHSTCANAKAQPTKGSKE 348
            ....|:|...:.|:        .:|:   |:.|:..|..         :.|......:..|    
  Rat   271 HNGSALLKMSALPK--------EQDDSALQIQKSFLDGI---------YKTIHRPPYEMVK---- 314

  Fly   349 TNGQSGLSGKSSPSLDDSSHEELTLDEI-------KKILIVDARSYTSAVTNRARGGGCECIEYY 406
                          .:|.|...|:|.||       |::.::|:.|                    
  Rat   315 --------------TEDLSSNFLSLQEIQSSYCKFKQLFLIDSSS-------------------- 345

  Fly   407 PCAEIEFMNLGNIHAIRKSFHAVRQLCASSPDDPNWYGQLEKTMWMQHLSGLLGATMTVVHTIEK 471
                 ||.:                      .|..|:..||.:.|:..:...|...:.::..:|.
  Rat   346 -----EFWD----------------------TDVKWFSLLESSGWLDIIRRCLKRAIEIIECLEA 383

  Fly   472 NGRPVLVHCSDGWDRTPQIVATAQLCLDPYYRTVEGFRVLVEREWLNFGHKFADRSGNGPNSDEV 536
            ....||:...:..|....:.:..|:.:|.:.||..||:.|:::||:..||.|.||..:...||: 
  Rat   384 QNMNVLLLEENASDLCCLLSSLVQVMMDAHCRTWTGFQSLIQKEWVMGGHSFLDRCNHLHQSDK- 447

  Fly   537 NERCPVFLQWLDLVHQIHRQYPCSFEFSISYLIKLAQHSLSCLFGTFLCNSLRERIEN------- 594
             |..||||.:||.|.|:..|:|.:|||:.:||..|:......:|.||..||..::..|       
  Rat   448 -EEVPVFLLFLDCVWQLVHQHPPAFEFTETYLTVLSDSLYIPIFSTFFFNSPHQKDTNMGRESLD 511

  Fly   595 ---------SVFDRTFSVWPFLAETMYRNPLY--KHETEKVLWPAHSVRFLYFWSDVYLGSLGNK 648
                     :|:|.:....| .|:|:.|||||  |.:.:|                      |.:
  Rat   512 AQSKPLTLLTVWDWSVQFEP-KAQTLLRNPLYVEKPKLDK----------------------GQR 553

  Fly   649 NGT--------DLPLLSNERQSGHNGLMAKTRSSEDLTTNELGQSTISR--RSSDPNLTVESIVT 703
            .|:        .|| |:..:.|...|...:  .::.|..|.||: .||:  .|||.         
  Rat   554 KGSRFKHQRQLSLP-LTQSKSSPKRGFFRE--ETDHLIKNLLGK-RISKLINSSDD--------- 605

  Fly   704 DCFNANSNSMFD 715
              ...||...:|
  Rat   606 --LQDNSREFYD 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3632NP_001096996.1 PH-like 35..147 CDD:302622 34/158 (22%)
Myotub-related 221..590 CDD:284109 86/380 (23%)
FYVE_MTMR4 1162..1221 CDD:277272
Mtmr12XP_006232108.1 PH-like 26..192 CDD:302622 37/203 (18%)
PTPc 211..497 CDD:304379 84/377 (22%)
3-PAP 562..686 CDD:289355 17/69 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349467
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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