DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3632 and Mtm1

DIOPT Version :9

Sequence 1:NP_001096996.1 Gene:CG3632 / 32589 FlyBaseID:FBgn0030735 Length:1250 Species:Drosophila melanogaster
Sequence 2:XP_038967748.1 Gene:Mtm1 / 288762 RGDID:1304582 Length:603 Species:Rattus norvegicus


Alignment Length:596 Identity:177/596 - (29%)
Similarity:269/596 - (45%) Gaps:131/596 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GILALSNYRIFLSKQSTGYETY--VPLGLIESVQV--------RDLFQLIVNCKDASTVRCSFPS 115
            |.|.::|||::|....|.....  ||||:|..::.        .:.:.|.:.|||...:|.:...
  Rat    61 GRLYITNYRLYLRSLETDLAPILDVPLGVISRIEKMGGVTSRGENSYGLDITCKDLRNLRFALKQ 125

  Fly   116 AEQCSDWQRRIHLMIGVPESLETLFAFPFYSWTCDVLGSGNGSGIVSAQANGNGLIAKDRCLTLH 180
                ....||....:....:....:..|.:::..:.....:|..|.                   
  Rat   126 ----EGHSRRDIFDVLTRHAFPLAYNLPLFAFVNEEKFKVDGWAIY------------------- 167

  Fly   181 NGLAKPTANVTASNPLPDPASETISAAMSNRLQRSVRYESDFKNEVARLGFDLKGSWRISTANAD 245
                         ||:                           .|..|.|...: .||||..|..
  Rat   168 -------------NPV---------------------------EEYRRQGLPDR-HWRISFVNQR 191

  Fly   246 FKLCPSYPPKLLVPCCITDEMLHNVANFRGSRRLPAVVWRHQKSGAILARCSQPEVGWLGWRNTR 310
            ::||.:||..|:||...:|:.|..||.||...|:|.:.|.|.::.|.:.|||||.||..|.|:..
  Rat   192 YELCDTYPALLVVPYRASDDDLRRVATFRSRNRIPVLSWIHPENRAAIMRCSQPLVGVGGKRSRD 256

  Fly   311 DEQLLKALADACAFDRGEHARHSTCANAKAQPTKGSKETNGQSGLSGKSSPSLDDSSHEELTLDE 375
            ||:.|..:                            :|||.|:                      
  Rat   257 DERYLDII----------------------------RETNKQT---------------------- 271

  Fly   376 IKKILIVDARSYTSAVTNRARGGGCECIEYYPCAEIEFMNLGNIHAIRKSFHAVRQLCASSPDDP 440
             .|:.|.|||...:||.|:|.|||.|..:.||.||:.|:::.|||.:|:|...||.:.....::.
  Rat   272 -SKLTIYDARPGVNAVANKATGGGYEGEDAYPHAELSFLDIHNIHVMRESLRRVRDIVYPHVEEA 335

  Fly   441 NWYGQLEKTMWMQHLSGLLGATMTVVHTIEKNGRPVLVHCSDGWDRTPQIVATAQLCLDPYYRTV 505
            :|...||.|.|::|:..||...:.|...:......||||||||||||.|:...|.|.||.:||::
  Rat   336 HWLSSLESTHWLEHIKLLLTGAIRVADKVASGLSSVLVHCSDGWDRTAQLTTLAMLMLDGFYRSI 400

  Fly   506 EGFRVLVEREWLNFGHKFADRSGNGPNSDEVNERCPVFLQWLDLVHQIHRQYPCSFEFSISYLIK 570
            |||.:||::||::|||||:.|.|:|..:....:|.|:|||::|.|.|:.:|:|.:|||:..:|:.
  Rat   401 EGFEILVQKEWISFGHKFSSRIGHGDKNHADADRSPIFLQFIDCVWQMTKQFPTAFEFNECFLVA 465

  Fly   571 LAQHSLSCLFGTFL--CNSLRERIENSVFDRTFSVWPFLAETM--YRNPLYKHETEKVLWPAHSV 631
            :..|..||.|||||  |.:.|||  ..:.:||.|||..:....  :.||.|..|:.:|::|..||
  Rat   466 ILDHLYSCRFGTFLLNCEAARER--QRLAERTVSVWSLINSNKDEFTNPFYARESNRVIYPVTSV 528

  Fly   632 RFLYFWSDVYL 642
            |.|..|.:.|:
  Rat   529 RHLELWVNYYI 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3632NP_001096996.1 PH-like 35..147 CDD:302622 20/95 (21%)
Myotub-related 221..590 CDD:284109 133/370 (36%)
FYVE_MTMR4 1162..1221 CDD:277272
Mtm1XP_038967748.1 PH-like 44..143 CDD:418428 19/85 (22%)
Myotub-related 162..489 CDD:399535 140/439 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349470
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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