DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3632 and mtmr8

DIOPT Version :9

Sequence 1:NP_001096996.1 Gene:CG3632 / 32589 FlyBaseID:FBgn0030735 Length:1250 Species:Drosophila melanogaster
Sequence 2:XP_004915812.2 Gene:mtmr8 / 100489239 XenbaseID:XB-GENE-948866 Length:676 Species:Xenopus tropicalis


Alignment Length:811 Identity:199/811 - (24%)
Similarity:329/811 - (40%) Gaps:204/811 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 ESIKYLGRTDD-----GILALSNYRIFLSKQSTG--YETYVP---LGLIESVQVRDL-FQLIVNC 103
            |::|...|..:     |.|.|:...:...:...|  .||::|   :.|:|.:.:... ..|::.|
 Frog    10 ENVKLFDRYTNKRPAVGTLYLTATHLIYVESGVGARKETWIPHHHISLVEKLALNTTGCPLVIRC 74

  Fly   104 KDASTVRCSFPSAEQCSDWQRRIH------LMIGVPESLETLFAFPFYSWTCDVLGSGNGSGIVS 162
            |       :|.:|......:|..|      |.:..|...|.|:||.:                  
 Frog    75 K-------NFRAAHFVIQRERDCHKVYTSLLKLSQPAKYEDLYAFSY------------------ 114

  Fly   163 AQANGNGLIAKDRCLTLHNGLAKPTANVTASNPLPDPASETISAAMSNRLQRSVRYES-DFKNEV 226
                                           ||..|            :.:|:|.::. |.:.|.
 Frog   115 -------------------------------NPSHD------------KDERAVGWKQVDLEVEF 136

  Fly   227 ARLGFDLKGSWRISTANADFKLCPSYPPKLLVPCCITDEMLHNVANFRGSRRLPAVVWRHQKSGA 291
            .|:|.. ...|:::..|.|:|:|.:||..|:||....:..:...|.||...|.|.:.:..:.:.|
 Frog   137 LRMGIP-NEFWKLTDLNKDYKVCSTYPTCLVVPKEANEATILGSAKFRSRGRFPVLSYYFKDNNA 200

  Fly   292 ILARCSQPEVGWLGWRNTRDEQLLKALADACAFDRGEHARHSTCANAKAQPTKGSKETNGQSGLS 356
            ::.|||||..|:.. |...||::|:.:                   .||.|              
 Frog   201 VICRCSQPLSGFSA-RCEDDEKMLETI-------------------GKANP-------------- 231

  Fly   357 GKSSPSLDDSSHEELTLDEIKKILIVDARSYTSAVTNRARGGGCECIEYYPCAEIEFMNLGNIHA 421
              .||.:                .:||.|...:|:.|||.|.|.|..:.||....:|:.:.|||.
 Frog   232 --GSPFM----------------YVVDTRPKLNAMANRAAGKGYENEDNYPNIRFKFIGIENIHV 278

  Fly   422 IRKSFHAVRQLC-ASSPDDPNWYGQLEKTMWMQHLSGLLGATMTVVHTIEKNGRPVLVHCSDGWD 485
            :|.|...:.::| ..||...|:...||.:.|::|:..::.|.:.:...::.....||||||||||
 Frog   279 MRNSLQKLLEVCEMKSPSMSNFLTVLENSGWLRHIKAVMDAGVFLAKVVQDENASVLVHCSDGWD 343

  Fly   486 RTPQIVATAQLCLDPYYRTVEGFRVLVEREWLNFGHKFADRSGN-GPNSDEVNERCPVFLQWLDL 549
            ||.|:.:.|.:.|||:|||::||..|:|:||::.||||..|.|: ..:..||:   |||.|:::.
 Frog   344 RTAQVCSLASILLDPFYRTIKGFMFLIEKEWISLGHKFTQRCGHLDVDPKEVS---PVFTQFVEC 405

  Fly   550 VHQIHRQYPCSFEFSISYLIKLAQHSLSCLFGTFLCNSLRERIENSVFDRTFSVWPFLAETM--Y 612
            |..:..|:||:||||..:|:::..|..||.||.|:.||.:||.|..:|:||.|:|.||.:..  :
 Frog   406 VWHLTEQFPCAFEFSERFLLEIHDHIFSCQFGNFIGNSQKEREELKIFERTHSLWQFLLQRKQEF 470

  Fly   613 RNPLYKHETEKVLWPAHSVRFLY-FWSDVYLGSLGNKNGTDLPLLSNERQSGHNGLMAKTRSSED 676
            .||||.|...|.|.|. ::.|.: ||..:|       |..|                        
 Frog   471 VNPLYTHLAYKTLRPI-TLPFTFKFWCGMY-------NRFD------------------------ 503

  Fly   677 LTTNELGQSTISRRSSDPNLTVESIVTDCFNANSN-SMFDIRSEANNSVSENVQESVKDSKEVEL 740
                         :...|...|...:.:|.|..:. ...:|.:|...:..:..::.......|.|
 Frog   504 -------------KGMHPRQCVLDYLLECMNKKAALEKSEIEAENKLAAQDFPEKKGPSVLSVHL 555

  Fly   741 DVTDATEVGPCGRSNNPIPDFHNDQSTASKRDILEVESQTQRRSSLESSQLIPGSVFIFGSSEND 805
            .....|||    .:|..||:...:::.....:....:|......:||::|.:.....:.|..||:
 Frog   556 QTVPTTEV----MANKDIPELSKEETKCQLSNGSMTDSDHNLIETLENNQSVSNGHNVTGEVENN 616

  Fly   806 KNA-----VPSESEE--SLATSQKLNSESGR 829
            .:.     |..|.|.  |:|....:..|..|
 Frog   617 LSVANGHNVTGEVENNLSVANGHNVTGEEDR 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3632NP_001096996.1 PH-like 35..147 CDD:302622 25/113 (22%)
Myotub-related 221..590 CDD:284109 117/370 (32%)
FYVE_MTMR4 1162..1221 CDD:277272
mtmr8XP_004915812.2 PH-like 1..103 CDD:418428 20/99 (20%)
PTP-MTMR8 126..433 CDD:350432 110/362 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.