DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3632 and XB5960519

DIOPT Version :9

Sequence 1:NP_001096996.1 Gene:CG3632 / 32589 FlyBaseID:FBgn0030735 Length:1250 Species:Drosophila melanogaster
Sequence 2:XP_031751608.1 Gene:XB5960519 / 100216114 XenbaseID:XB-GENE-5960520 Length:563 Species:Xenopus tropicalis


Alignment Length:617 Identity:160/617 - (25%)
Similarity:239/617 - (38%) Gaps:163/617 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GILALSNYRIFLSKQSTG----YETYVPLGLI--------ESVQVRDLFQ--------------- 98
            |.|.:|::.:.|...|.|    .|....|.|:        :|||.....|               
 Frog    27 GTLCVSSHHLLLCDASVGDRDKREDIAELWLLHCAVDKVEKSVQNIGRLQNTENGQEMDVESGSG 91

  Fly    99 -LIVNCKDASTVRCSFPSAEQCSDWQRRIHLMIGVPESLETL-FAFPFYSWTCDVLGSGNGSGIV 161
             :.:.|||...:....|..|:..:..|.:..:    .||:.: .::||:                
 Frog    92 TVTLRCKDLRVIHMEIPGMEETLNIARSVQAL----SSLDIVTLSYPFF---------------- 136

  Fly   162 SAQANGNGLIAKDRCLTLHNGLAKPTANVTASNPLPDPASETISAAMSNRLQRSVRYESDFKNEV 226
                      .:....:|.:|..:.|                    |.| ....:|.|:|     
 Frog   137 ----------FRPPGYSLGHGWPRDT--------------------MEN-FYHKMRAETD----- 165

  Fly   227 ARLGFDLKGSWRISTANADFKLCPSYPPKLLVPCCITDEMLHNVANFRGSRRLPAVVWRHQKSGA 291
                     .||:|..|.|||:|||||.|::||...:||.|...|.||.:.|.|.:.:.|..:..
 Frog   166 ---------DWRLSEVNLDFKICPSYPAKVIVPRICSDETLQKAAAFRQAGRFPVLSYYHSANQT 221

  Fly   292 ILARCSQPEVGWLGWRNTRDEQLLKALADACAFDRGEHARHSTCANAKAQPTKGSKETNGQSGLS 356
            .|.|.:||..|........||.||.|                    |..:.:.|           
 Frog   222 ALLRSAQPLFGTAPHHCKHDEALLNA--------------------ALMEQSSG----------- 255

  Fly   357 GKSSPSLDDSSHEELTLDEIKKILIVDARSYTSAVTNRARGGGCECIEYYPCAEIEFMNLGNIHA 421
                                   .|:|.||...|...|..|||.|....|....:....|...||
 Frog   256 -----------------------FIIDTRSAQEAKQARNEGGGTESKSRYRNWRVLHRPLERGHA 297

  Fly   422 IRKSFHAVRQLCASSPDDPN-----WYGQLEKTMWMQHLSGLLGATMTVVHTIEKNGRPVLVHCS 481
            ::.|...:...|.    ||:     |..:|:...|:.|:...|.....:...||:....||||..
 Frog   298 LQDSLVRLVVTCY----DPSIGMTRWLSKLQAARWLSHVKEALSTAGLIAECIERECANVLVHGE 358

  Fly   482 DGWDRTPQIVATAQLCLDPYYRTVEGFRVLVEREWLNFGHKFADR-SGNGPNSDEVNERCPVFLQ 545
            ||.|.|..:.:.|||.|.|..||::||:.|:|||||..||.|..| :.:|.:.....:..|.||.
 Frog   359 DGTDNTLLLTSLAQLILCPESRTMDGFQDLIEREWLQAGHPFQLRCAQSGWSQSRAQQESPHFLL 423

  Fly   546 WLDLVHQIHRQYPCSFEFSISYLIKLAQHSLSCLFGTFLCNSLRERIENSVFDRTFSVWPFLAET 610
            :||...|:.||:|.:.||:..:|..||.|:.|..:|:||||:.:||.:..|.|||.|:|..|.:.
 Frog   424 FLDCCWQLGRQFPRALEFNERFLCTLATHAYSSEYGSFLCNNEKERCQYEVQDRTHSLWGHLNQP 488

  Fly   611 MYR----NPLYKHETEKVLWPAHSVRFLYFWS 638
            ..|    ||:|: |...|:||:.:.:.|..|:
 Frog   489 KERQQLLNPIYQ-ENPLVIWPSVAPQSLQLWA 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3632NP_001096996.1 PH-like 35..147 CDD:302622 23/114 (20%)
Myotub-related 221..590 CDD:284109 111/374 (30%)
FYVE_MTMR4 1162..1221 CDD:277272
XB5960519XP_031751608.1 PH-GRAM_MTMR9 1..121 CDD:275398 19/93 (20%)
Myotub-related 147..470 CDD:399535 118/415 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.