DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9911 and pdia8

DIOPT Version :9

Sequence 1:NP_573111.1 Gene:CG9911 / 32588 FlyBaseID:FBgn0030734 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_001003517.1 Gene:pdia8 / 445123 ZFINID:ZDB-GENE-040801-20 Length:493 Species:Danio rerio


Alignment Length:440 Identity:120/440 - (27%)
Similarity:181/440 - (41%) Gaps:82/440 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LVAILQLLQYTQPADAAGAVPMTSDNIDMTLASNELVFLNFYAEWCRFSNILAPIFAEAADKIKE 81
            |:.||.....:...:.:..:.:|..:.|.....:|.:.:.|||.||.....|||.|..||.::| 
Zfish     9 LLCILVCSLSSSAREHSDVLKLTDADFDYLAPEHETLLVKFYAPWCGHCKKLAPEFESAASRLK- 72

  Fly    82 EFPEAGKVVLGKVDCDKETAIASRFHINKYPTLKIVRNGQLSKREYRGQRSAEAFLEFVKKQLED 146
                 |.|.|.||||...|.|...:.:|.||||||.||||.|. .|.|.|||:..::::|||...
Zfish    73 -----GTVTLAKVDCTANTEICKHYGVNGYPTLKIFRNGQESS-SYDGPRSADGIVDYMKKQAGP 131

  Fly   147 PIQEFKSLKDLE----NLDSKKRLILGYFDRRDQPEYDIFRKVATNLKEDCQF-HVGFGDAAQAM 206
            ......|..|||    :.|:.   ::|.|...|..:...|.|.|:.::|..:| |.......|..
Zfish   132 DSVLLHSELDLEKFINHFDAS---VVGLFSGTDSSQLAEFLKGASLMRESFRFAHTTDLQLGQKY 193

  Fly   207 HPPGTPIIVFRPDVALSHENDET---YTGSLQNFDELKIWVQEKCVPLVREITFENAEELTEEGL 268
            ......|::||.. .||.:.:|:   :|||| :...|:.::::....|...:|.:|.|.|.:..|
Zfish   194 GVTHESILLFRAP-RLSSKFEESVVPHTGSL-SVTGLRRFIRDNIFGLCPHMTKDNKEVLRKRDL 256

  Fly   269 PF----LILFHHPTDHNSIKDYKSIIERQLLDEKQNVNFLTADGKRFAHPL-HHLGKSEDD---L 325
            ..    |...|:|...|..::  .:::.......|.:.|..|:...|...| ...|.|..|   |
Zfish   257 LTAYYDLDYLHNPKGSNYWRN--RVLKVATKFSSQGMLFSVANRNDFMEELEEEFGLSASDGNEL 319

  Fly   326 PLIAIDSFKHMYLFPHFSDMYS-------PGK-LKQFLQDLYSGKLHREFHYGPDPS-------- 374
            |.:.|.:        ...|.||       .|| |:.||:|.::|:|.|.....|.|:        
Zfish   320 PFVTIRT--------RTGDKYSMREEFTRDGKSLESFLEDYFAGRLKRYVKSEPVPAINNGVVKV 376

  Fly   375 ----------NDIEPD-------PHTGKGTSPPESKFKELGPSKHRYTLL 407
                      ||.|.|       |..|        ..|:|.|   :||.|
Zfish   377 VVADTFEEIVNDPEKDVLIEFYAPWCG--------HCKKLEP---KYTAL 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9911NP_573111.1 PDI_a_ERp44 33..140 CDD:239294 41/106 (39%)
PDI_b_ERp44 148..241 CDD:239368 25/100 (25%)
Thioredoxin_6 171..357 CDD:290560 49/205 (24%)
PDI_b'_ERp44 252..362 CDD:239370 29/125 (23%)
pdia8NP_001003517.1 ER_PDI_fam 25..484 CDD:273457 117/424 (28%)
pdi_dom 30..129 CDD:273454 43/105 (41%)
PDI_b_ERp57 132..236 CDD:239367 26/108 (24%)
PDI_b'_ERp72_ERp57 240..353 CDD:239371 29/122 (24%)
PDI_a_PDI_a'_C 373..476 CDD:239293 12/54 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.