DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9911 and CG5554

DIOPT Version :9

Sequence 1:NP_573111.1 Gene:CG9911 / 32588 FlyBaseID:FBgn0030734 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_001286784.1 Gene:CG5554 / 37775 FlyBaseID:FBgn0034914 Length:330 Species:Drosophila melanogaster


Alignment Length:167 Identity:48/167 - (28%)
Similarity:74/167 - (44%) Gaps:25/167 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CVALVAILQLLQYTQPADAAGAVP------MTSDNIDMTLASNELVFLNFYAEWCRFSNILAPI- 71
            |.||:.:....|.|..|. :|..|      :..||..:.|....::  .|:|.||.....|||. 
  Fly    12 CAALLLLAATAQSTAAAQ-SGLQPGGKLIELDEDNWHLMLQGEWMI--EFFAPWCPACKNLAPTW 73

  Fly    72 --FAEAADKIKEEFPEAGKVVLGKVDCDKETAIASRFHINKYPTLKIVRNGQLSKREYRGQRSAE 134
              ||..|..:        :|.:.|:|.....:::.||.:...||:..|::|:.  |:|||.|..:
  Fly    74 ERFARVAKDV--------QVQVAKIDVTTSPSLSGRFFVTALPTIYHVKDGEF--RQYRGARDGD 128

  Fly   135 AFLEFVKKQLEDPIQEFKSLKDLENLDSKKRLILGYF 171
            |.|.|||||....|:...:.|   ..|:....:|.||
  Fly   129 ALLYFVKKQQWQSIEPLSAWK---KPDTTHMSVLSYF 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9911NP_573111.1 PDI_a_ERp44 33..140 CDD:239294 31/115 (27%)
PDI_b_ERp44 148..241 CDD:239368 6/24 (25%)
Thioredoxin_6 171..357 CDD:290560 1/1 (100%)
PDI_b'_ERp44 252..362 CDD:239370
CG5554NP_001286784.1 PDI_a_TMX 36..136 CDD:239292 31/111 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463726
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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