DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9911 and pdia6

DIOPT Version :9

Sequence 1:NP_573111.1 Gene:CG9911 / 32588 FlyBaseID:FBgn0030734 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_922915.2 Gene:pdia6 / 322160 ZFINID:ZDB-GENE-030131-879 Length:440 Species:Danio rerio


Alignment Length:472 Identity:104/472 - (22%)
Similarity:169/472 - (35%) Gaps:137/472 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YTQPADAAGAVPMTSDNIDM-TLASNELVFLNFYAEWCRFSNILAPIFAEAADKIKEEFPEAGKV 89
            ||...|   .|.:...|.:. .:.|:.|..:.|||.||.....|||.:.:||..:|      |.|
Zfish    21 YTSSDD---VVELNPSNFNREVIQSDSLWLVEFYAPWCGHCKSLAPEWKKAATALK------GIV 76

  Fly    90 VLGKVDCDKETAIASRFHINKYPTLKIVRNGQLSKREYRGQRSAEAFLEFVKKQLEDPIQE---- 150
            .:|.||.|:..::..::.:..:||:||....:....:|:|.|:.:|.::.....|...:::    
Zfish    77 KVGAVDADQHNSLGGQYGVRGFPTIKIFGGNKHKPEDYQGGRTNQAIVDAALNALRSLVKDRLGG 141

  Fly   151 --------------FKSLKDLENL--DSKKRLILGYFD--------------RRDQPEYDIFRKV 185
                          ..:.||:..|  |:..|.:|...|              :..:||:   ...
Zfish   142 KTGGSDYSRQSGGGAGNKKDVVELTDDNFDRTVLESDDVWLVEFFAPWCGHCKNLEPEW---TAA 203

  Fly   186 ATNLK-----------EDCQFHVGFGDAAQAMHPPGTPII-VFRPDVALSHENDETYTGSLQNFD 238
            ||.:|           ||...|.|.   |......|.|.| |||     ..|..|.|.|.....|
Zfish   204 ATEVKEQTKGKVRLAAEDATVHQGL---ASRFGIRGFPTIKVFR-----KGEEPEDYQGGRTRSD 260

  Fly   239 ----ELKIWVQEKCVPLVREITFENAEELTEEGLPFLILFHHP-------TDHNS-IKDYKSIIE 291
                .|:::......|.::|:..|...:.|.|.....|:...|       :..|| ::..|::.|
Zfish   261 IVARALELYSDNIPAPELQEVLNEGILKKTCEDYQLCIIAVLPHILDTGASGRNSYLEVMKTMAE 325

  Fly   292 RQLLDEKQNVNFL-TADGKR-----------FAHPLHHLGKSEDDLPLIAIDSFKHMYLFPHFSD 344
            :.   :|:...:| |..|.:           |.:|           .:.||:|.|  ..|.....
Zfish   326 KH---KKKMWGWLWTEAGAQMELEASLGIGGFGYP-----------AMAAINSRK--MKFALLKG 374

  Fly   345 MYSPGKLKQFLQDLYSGKLHREFHYGPDPSNDIEPDPHTGKGTSPP-------ESKFKELGPSKH 402
            .:|...:.:||::|..|:       |...:        .|.|..|.       :.|..|| |.:.
Zfish   375 SFSETGIHEFLRELSVGR-------GSTAT--------VGGGALPKINTVQAWDGKDGEL-PMED 423

  Fly   403 RYTL-------LEKDEL 412
            ...|       ||||||
Zfish   424 DIDLSDVDLDDLEKDEL 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9911NP_573111.1 PDI_a_ERp44 33..140 CDD:239294 29/107 (27%)
PDI_b_ERp44 148..241 CDD:239368 28/142 (20%)
Thioredoxin_6 171..357 CDD:290560 48/235 (20%)
PDI_b'_ERp44 252..362 CDD:239370 25/129 (19%)
pdia6NP_922915.2 ER_PDI_fam 25..262 CDD:273457 59/256 (23%)
PDI_a_P5 26..128 CDD:239299 30/110 (27%)
PDI_a_P5 161..266 CDD:239299 27/115 (23%)
P5_C 275..404 CDD:239281 30/159 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.