DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9911 and Pdia6

DIOPT Version :9

Sequence 1:NP_573111.1 Gene:CG9911 / 32588 FlyBaseID:FBgn0030734 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_001004442.1 Gene:Pdia6 / 286906 RGDID:628688 Length:445 Species:Rattus norvegicus


Alignment Length:468 Identity:109/468 - (23%)
Similarity:182/468 - (38%) Gaps:88/468 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ARIGIGKLGPCVALVAILQLLQYTQPADAAGAVPMTSDNIDM-TLASNELVFLNFYAEWCRFSNI 67
            ||:.:| |..|...:|:..|  |:...|   .:.:|..|.:. .:.|:.|..:.|||.||.....
  Rat     7 ARLVLG-LVSCTFFLAVSAL--YSSSDD---VIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQR 65

  Fly    68 LAPIFAEAADKIKEEFPEAGKVVLGKVDCDKETAIASRFHINKYPTLKIVRNGQLSKREYRGQRS 132
            |.|.:.:||..:|:      .|.:|.|:.||..::..::.:..:||:||....:....:|:|.|:
  Rat    66 LTPEWKKAASALKD------VVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRT 124

  Fly   133 AEAFL--------EFVKKQL--------------------EDPIQEFKSLKDLENLDSKKRLILG 169
            .||.:        :.||.:|                    :|.::......|...|||:...::.
  Rat   125 GEAIVDAALSALRQLVKDRLGGRSGGYSSGKQGRGDSSSKKDVVELTDDTFDKNVLDSEDVWMVE 189

  Fly   170 YFD------RRDQPEYDIFRKVATNLKEDCQFHVGFG--DA------AQAMHPPGTPII-VFRPD 219
            ::.      :..:||:   ...||.:||..:..|...  ||      |......|.|.| :|:  
  Rat   190 FYAPWCGHCKNLEPEW---AAAATEVKEQTKGKVKLAAVDATVNQVLASRYGIKGFPTIKIFQ-- 249

  Fly   220 VALSHENDETYTGSLQNFD----ELKIWVQEKCVPLVREITFEN-AEELTEEG-------LPFLI 272
               ..|:...|.|.....|    .|.::......|.:.||..|: |::..||.       ||. |
  Rat   250 ---KGESPVDYDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDIAKKTCEEHQLCVVAVLPH-I 310

  Fly   273 LFHHPTDHNSIKDYKSIIERQLLD--EKQNVNFLTADGKRFAHPLHHLGKSEDDLPLIAIDSFKH 335
            |....|..||   |..:: .:|.|  :|:...:|..:........:.||......|.:|..:.:.
  Rat   311 LDTGATGRNS---YLEVL-LKLADKYKKKMWGWLWTEAGAQYELENALGIGGFGYPAMAAINARK 371

  Fly   336 MYLFPHFSDMYSPGKLKQFLQDLYSGKLHREFHYGPDPSNDIEPDPHTGK-GTSPPESKFKELGP 399
            | .|......:|...:.:||::|..|:.......|....|....:|..|| |..|.|.   ::..
  Rat   372 M-KFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGSFPNITPREPWDGKDGELPVED---DIDL 432

  Fly   400 SKHRYTLLEKDEL 412
            |......||||||
  Rat   433 SDVELDDLEKDEL 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9911NP_573111.1 PDI_a_ERp44 33..140 CDD:239294 28/115 (24%)
PDI_b_ERp44 148..241 CDD:239368 22/111 (20%)
Thioredoxin_6 171..357 CDD:290560 47/214 (22%)
PDI_b'_ERp44 252..362 CDD:239370 28/119 (24%)
Pdia6NP_001004442.1 PDI_a_P5 31..133 CDD:239299 29/110 (26%)
PDI_a_P5 166..271 CDD:239299 23/112 (21%)
P5_C 280..409 CDD:239281 31/134 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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