DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9911 and Pdia3

DIOPT Version :9

Sequence 1:NP_573111.1 Gene:CG9911 / 32588 FlyBaseID:FBgn0030734 Length:412 Species:Drosophila melanogaster
Sequence 2:NP_031978.2 Gene:Pdia3 / 14827 MGIID:95834 Length:505 Species:Mus musculus


Alignment Length:452 Identity:119/452 - (26%)
Similarity:199/452 - (44%) Gaps:85/452 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CVALV-AILQLLQYTQPADAAGAVPMTSDNIDMTLA---SNELVFLNFYAEWCRFSNILAPIFAE 74
            |:||: .:..||...:.|.|:..:.:|.:|.:..::   |..|:.:.|:|.||.....|||.:..
Mouse     5 CLALLPGVALLLASARLAAASDVLELTDENFESRVSDTGSAGLMLVEFFAPWCGHCKRLAPEYEA 69

  Fly    75 AADKIKEEFPEAGKVVLGKVDCDKETAIASRFHINKYPTLKIVRNGQLSKREYRGQRSAEAFLEF 139
            ||.::|      |.|.|.||||...|...:::.::.||||||.|:|: ....|.|.|:|:..:..
Mouse    70 AATRLK------GIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGE-EAGAYDGPRTADGIVSH 127

  Fly   140 VKKQ---------LEDPIQEFKSLKDLENLDSKKRLILGYFDRRDQPEYDIFRKVATNLKEDCQF 195
            :|||         .|:..::|.|.||..        ::|:|.......:..|.|.|:||:::.:|
Mouse   128 LKKQAGPASVPLRTEEEFKKFISDKDAS--------VVGFFRDLFSDGHSEFLKAASNLRDNYRF 184

  Fly   196 -HVGFGDAAQAMHPPGTPIIVFRPDVALSHENDET--YTGSLQNFDELKIWVQEKCVPLVREITF 257
             |.......:.....|..|.:|||....:...|:|  ||.......::|.::|:....|...:|.
Mouse   185 AHTNIESLVKEYDDNGEGITIFRPLHLANKFEDKTVAYTEKKMTSGKIKKFIQDSIFGLCPHMTE 249

  Fly   258 ENAEELTEEGLPFLILFHHPTDH-------NSIKDYKSIIERQLLDEKQNVNFLTADGKRFAHPL 315
            :|.:.:..:.   |:..::..|:       |..::...::.::.||....:||..|..|.|:|.|
Mouse   250 DNKDLIQGKD---LLTAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHEL 311

  Fly   316 HHLG--KSEDDLPLIAIDSFK--HMYLFPHFSDMYSPGK-LKQFLQDLYSGKLHR--------EF 367
            ...|  .:..::|::||.:.|  ...:...||   ..|| |:||||:.:.|.|.|        |.
Mouse   312 SDFGLESTTGEVPVVAIRTAKGEKFVMQEEFS---RDGKALEQFLQEYFDGNLKRYLKSEPIPES 373

  Fly   368 HYGP----------DPSNDIEPD-------PHTG--KGTSPPESKFKELGPSKHRYTLLEKD 410
            :.||          |..|:.:.|       |..|  |...|   |:||||..      |.||
Mouse   374 NEGPVKVVVAENFDDIVNEEDKDVLIEFYAPWCGHCKNLEP---KYKELGEK------LSKD 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9911NP_573111.1 PDI_a_ERp44 33..140 CDD:239294 34/109 (31%)
PDI_b_ERp44 148..241 CDD:239368 22/95 (23%)
Thioredoxin_6 171..357 CDD:290560 47/200 (24%)
PDI_b'_ERp44 252..362 CDD:239370 28/121 (23%)
Pdia3NP_031978.2 ER_PDI_fam 26..487 CDD:273457 112/431 (26%)
Thioredoxin 27..131 CDD:278513 35/110 (32%)
PDI_b_ERp57 135..240 CDD:239367 25/112 (22%)
PDI_b'_ERp72_ERp57 244..357 CDD:239371 28/118 (24%)
PDI_a_PDI_a'_C 377..480 CDD:239293 16/59 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 484..505
Prevents secretion from ER. /evidence=ECO:0000250 502..505
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.