DRSC/TRiP Functional Genomics Resources

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Protein Alignment caz and AT1G67325

DIOPT Version :10

Sequence 1:NP_523365.2 Gene:caz / 32587 FlyBaseID:FBgn0285954 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001185341.1 Gene:AT1G67325 / 843053 AraportID:AT1G67325 Length:288 Species:Arabidopsis thaliana


Alignment Length:264 Identity:64/264 - (24%)
Similarity:81/264 - (30%) Gaps:95/264 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 DFNGNAIKVSLAQRQNNWNKGGGGGGGGGGRGGFGGRRGGGGGGGG----------GGGGGGRFD 247
            |.||.:....:..:|...:.|...|.||......||...|.....|          .||....|:
plant    54 DHNGKSAPKPMQHQQGFSSPGAYLGSGGPPPVYMGGSPYGSPLFNGSSMPPYDVPFSGGSPYHFN 118

  Fly   248 ----------------------RGGG--GGGGRY------DRGGGG--GGGGGGGNVQP------ 274
                                  .||.  |.||.|      ||.|.|  .|.|....:.|      
plant   119 YNSRMPAGAHYRPLHMSGPPPYHGGSMMGSGGMYGMPPPIDRYGLGMAMGPGSAAAMMPRPRFYP 183

  Fly   275 ----------RDGDWKCNSCNNTNFAWRNECN--RCKTPKGDDEGSSGGGGGGGYGGGGGGGGYD 327
                      ||.||.|.:|.|.||::|..||  :|.|||               .|...||..|
plant   184 DEKSQKRDSTRDNDWTCPNCGNVNFSFRTVCNMRKCNTPK---------------PGSQQGGSSD 233

  Fly   328 RGNDRGSGGGGYHNRDRGGNSQGGGGGGGGGGGY---SRFNDNNGGG--RGGRGGGGGNRRDGGP 387
            :.:.:.:..|.: ..|..||.           .|   |:.|..|.|.  .|.|..|..:|   .|
plant   234 KISKQNAPEGSW-KCDNCGNI-----------NYPFRSKCNRQNCGADKPGDRSNGSPSR---AP 283

  Fly   388 MRND 391
            ..||
plant   284 EEND 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cazNP_523365.2 RRM_SARFH 122..204 CDD:240978 3/10 (30%)
zf-RanBP 275..304 CDD:395516 16/30 (53%)
RanBP2-type Zn finger 279..298 CDD:275375 9/20 (45%)
AT1G67325NP_001185341.1 zf-RanBP 22..52 CDD:395516
ZnF_RBZ 196..222 CDD:197784 11/25 (44%)
RanBP2-type Zn finger 198..219 CDD:275375 9/20 (45%)
zf-RanBP 241..272 CDD:395516 9/42 (21%)
RanBP2-type Zn finger 245..266 CDD:275375 6/32 (19%)
Blue background indicates that the domain is not in the aligned region.

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