DRSC/TRiP Functional Genomics Resources

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Protein Alignment caz and TAF15

DIOPT Version :9

Sequence 1:NP_523365.2 Gene:caz / 32587 FlyBaseID:FBgn0285954 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_564565.1 Gene:TAF15 / 841452 AraportID:AT1G50300 Length:372 Species:Arabidopsis thaliana


Alignment Length:322 Identity:104/322 - (32%)
Similarity:138/322 - (42%) Gaps:91/322 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 TIFVSGMDPSTTEQDIETHFGAIGIIKKDKRTMKPKIWLYKNKETGASKGEATVTYDDTNAAQSA 185
            :::||.:...|.|..:..:||.||::|:||||..||:|||::|||...||:|||||:|.:||.:|
plant     9 SVYVSNLPLGTDENMLADYFGTIGLLKRDKRTGTPKVWLYRDKETDEPKGDATVTYEDPHAALAA 73

  Fly   186 IEWFDGRDFNGNAIKVSLAQRQNNWNKGGGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDRGG 250
            :|||:.:||:||.|.|.:|:.:|.                          ..|.......||   
plant    74 VEWFNNKDFHGNTIGVFMAESKNK--------------------------NAGDAVEFVEFD--- 109

  Fly   251 GGGGGRYDRGGGGGGGGGGGNVQP--RDGDWKC--NSCNNTNFAWRNECNRCKT--PKGDDEGSS 309
             ||....:.|.|.|.|....:.:|  :||||.|  .||.|.|||:|..||||.|  |.|...||.
plant   110 -GGAEETNGGAGRGRGQADSSAKPWQQDGDWMCPNTSCTNVNFAFRGVCNRCGTARPAGASGGSM 173

  Fly   310 GGGGGGGYGGGGGGGGYDRGNDRGSGGGGYHNRDRGGNSQGGGGGGGGGGGY------------- 361
            |.|.|.|.|||..||.                  .|....|...|..|...:             
plant   174 GAGRGRGRGGGADGGA------------------PGKQPSGAPTGLFGPNDWACPMCGNVNWAKR 220

  Fly   362 --------SRFNDNNGGGRGGRGGG------------GGNRR----DGGPMRNDGGMRSRPY 399
                    ::...|.||.|||||||            ...||    |.|.|.::.|...:.|
plant   221 LKCNICNTNKPGQNEGGVRGGRGGGYKELDEQELEETKRRRREAEEDDGEMYDEFGNLKKKY 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cazNP_523365.2 RRM <118..>205 CDD:223796 41/83 (49%)
RRM_SARFH 122..204 CDD:240978 41/81 (51%)
zf-RanBP 275..304 CDD:279035 18/32 (56%)
RanBP2-type Zn finger 279..298 CDD:275375 11/20 (55%)
TAF15NP_564565.1 RRM <7..>97 CDD:223796 42/87 (48%)
RRM_SARFH 10..92 CDD:240978 41/81 (51%)
ZnF_RBZ 137..162 CDD:197784 15/24 (63%)
RanBP2-type Zn finger 139..160 CDD:275376 11/20 (55%)
ZnF_RBZ 205..228 CDD:197784 0/22 (0%)
RanBP2-type Zn finger 207..226 CDD:275376 0/18 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 96 1.000 Domainoid score I2474
eggNOG 1 0.900 - - E1_KOG1995
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 154 1.000 Inparanoid score I1686
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002238
OrthoInspector 1 1.000 - - oto3617
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X712
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.820

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