DRSC/TRiP Functional Genomics Resources

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Protein Alignment caz and taf15

DIOPT Version :9

Sequence 1:NP_523365.2 Gene:caz / 32587 FlyBaseID:FBgn0285954 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001004806.1 Gene:taf15 / 448047 XenbaseID:XB-GENE-984011 Length:501 Species:Xenopus tropicalis


Alignment Length:430 Identity:165/430 - (38%)
Similarity:199/430 - (46%) Gaps:126/430 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ERGGYGGGSGQGYNNFAVPPPNYQQMPNKTGNYNE----PPPNYGKQGGGY----------DSG- 51
            ||.|||....||.::    .|.|.|..::.|.|::    ...:|..:..||          ||| 
 Frog   166 ERPGYGEQPQQGSSD----QPGYGQKQSQQGRYDQTGGFEQQSYQSRKEGYGHSHQEDDRRDSGR 226

  Fly    52 -SGHRGSGGSGNGGGGGGSWNDRGGNSYGNGGASKDSYNKGHGGYSGGGGGGGGGGGGGSGG--- 112
             .|.||.||:...|||.|    |||            ::....||.||..||..||....||   
 Frog   227 YGGDRGYGGAQGFGGGRG----RGG------------FDSERRGYQGGMSGGDRGGSKNFGGPRD 275

  Fly   113 ------NDMITQED--TIFVSGMDPSTTEQDIETHFGAIGIIKKDKRTMKPKIWLYKNKETGASK 169
                  ||.....|  ||||.||....|:..|..:|..|||||.:|:|.||.|.||.:||||.||
 Frog   276 YGSKQDNDDQDNSDNNTIFVQGMGEDATQDQISDYFKQIGIIKINKKTGKPMINLYTDKETGKSK 340

  Fly   170 GEATVTYDDTNAAQSAIEWFDGRDFNGNAIKVSLAQRQNNWNKGGGGGGGGGGRGGFGGRRGGGG 234
            |||||::||..:|::|||||||:.|..|.||||.|.|:..:.:||.|||||.|.|  |||||||.
 Frog   341 GEATVSFDDPPSAKAAIEWFDGKMFLDNVIKVSFATRRPEFMRGGAGGGGGAGGG--GGRRGGGH 403

  Fly   235 GGGGGGGGGGRFDRGGGGGGGRYDRGGGGGGGGGGGNVQPRDGDWKC--NSCNNTNFAWRNECNR 297
            .|||.||.|..             ||||||         |::|||.|  .||.|.|||.|:.||:
 Frog   404 RGGGFGGRGSY-------------RGGGGG---------PQNGDWVCPNPSCGNVNFARRDSCNQ 446

  Fly   298 CKTPKGDDEGSSGGGGGGGYGGGGGGGGYDRG-NDRGSGGGGYHNRDRGGNSQGGGGGGGGGGGY 361
            |..|:.:|....|..|.|||||       ||| ..||.||||:                      
 Frog   447 CSEPRPEDSRHGGDRGRGGYGG-------DRGFRGRGRGGGGF---------------------- 482

  Fly   362 SRFNDNNGGGRGGRGGGGGNRRDGGPMRND--GGMRSRPY 399
                       ||:.||          |||  ...|:|||
 Frog   483 -----------GGKMGG----------RNDFRSDQRNRPY 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cazNP_523365.2 RRM <118..>205 CDD:223796 49/88 (56%)
RRM_SARFH 122..204 CDD:240978 47/81 (58%)
zf-RanBP 275..304 CDD:279035 15/30 (50%)
RanBP2-type Zn finger 279..298 CDD:275375 11/20 (55%)
taf15NP_001004806.1 dnaA 76..>220 CDD:237605 15/57 (26%)
RRM_SF 292..374 CDD:388407 47/81 (58%)
ZnF_RBZ 424..450 CDD:197784 14/25 (56%)
RanBP2-type Zn finger 426..447 CDD:275376 11/20 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 90 1.000 Domainoid score I7662
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 268 1.000 Inparanoid score I2958
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1539664at2759
OrthoFinder 1 1.000 - - FOG0002238
OrthoInspector 1 1.000 - - otm48325
Panther 1 1.100 - - LDO PTHR23238
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X712
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.160

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