DRSC/TRiP Functional Genomics Resources

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Protein Alignment caz and zranb2

DIOPT Version :9

Sequence 1:NP_523365.2 Gene:caz / 32587 FlyBaseID:FBgn0285954 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_017211949.1 Gene:zranb2 / 406716 ZFINID:ZDB-GENE-040426-2743 Length:324 Species:Danio rerio


Alignment Length:66 Identity:21/66 - (31%)
Similarity:30/66 - (45%) Gaps:23/66 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 DWKCNSCNNTNFAWRNECNRCKTPKGDDEGSSGGGGGGGYGGGGGGGGYDRGNDRGSGGGGYHNR 342
            ||:|.:|.|.|:|.|:|||.|.|||                       |.:..:|...|||::.|
Zfish    68 DWQCKTCGNVNWARRSECNMCNTPK-----------------------YAKLEERTGYGGGFNER 109

  Fly   343 D 343
            :
Zfish   110 E 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cazNP_523365.2 RRM <118..>205 CDD:223796
RRM_SARFH 122..204 CDD:240978
zf-RanBP 275..304 CDD:279035 15/25 (60%)
RanBP2-type Zn finger 279..298 CDD:275375 10/18 (56%)
zranb2XP_017211949.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1995
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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