DRSC/TRiP Functional Genomics Resources

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Protein Alignment caz and ewsr1a

DIOPT Version :9

Sequence 1:NP_523365.2 Gene:caz / 32587 FlyBaseID:FBgn0285954 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001108610.1 Gene:ewsr1a / 323597 ZFINID:ZDB-GENE-030131-2317 Length:626 Species:Danio rerio


Alignment Length:468 Identity:180/468 - (38%)
Similarity:228/468 - (48%) Gaps:91/468 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ERGGYGGGSGQGY---------NNFAVPPPNYQQMPNK-----TGNYNEP--------------- 37
            ::|||.|..| ||         ..:...||..||.|..     :|:|.:|               
Zfish   180 QQGGYQGQQG-GYGQQSSYSQQGGYQQTPPQQQQAPPSSYAPPSGSYGQPSASQYGQQGSTGGGY 243

  Fly    38 ------PPN-YG------KQGGGYDSGSGHRGSGGSGNGGGGGGSWN---DRGGNSYG---NGGA 83
                  ||| ||      :.|||| ||....|.||.|.|.|.||..|   .|||...|   .||.
Zfish   244 GQSDYKPPNQYGSYRPDHQNGGGY-SGPESGGYGGPGEGRGMGGGENRGRGRGGFDRGMMRGGGG 307

  Fly    84 SKDSYNKGHGGYSGGGGGGGGGGGGGSGGNDMITQED----TIFVSGMDPSTTEQDIETHFGAIG 144
            .:...::|..|.:|..||....|.|..|..:  .|:|    ||:::|:..:.|.:::...|...|
Zfish   308 MRGGMSRGGMGIAGDRGGFSKPGDGEMGAPE--EQDDSENSTIYITGLTENATLEEVADFFKHSG 370

  Fly   145 IIKKDKRTMKPKIWLYKNKETGASKGEATVTYDDTNAAQSAIEWFDGRDFNGNAIKVSLAQRQNN 209
            ||:.:|||..|.:.:|.:|:||..||:||::|::..:|::|:|||||:||.|..:|||:|:|:..
Zfish   371 IIRINKRTGLPAVNIYTDKDTGKPKGDATLSYEEPPSAKAAVEWFDGKDFQGKKLKVSMARRKPM 435

  Fly   210 WNKGGGGGGGGGGRGGFGGRRG--GGGGGGGGGGGGGRFDRGGGGGGGRYDRGGGGGGGGGGGNV 272
            .....||....|.|||..||.|  |.||.|.||..||...|||..|.||        ||..|||:
Zfish   436 MGMMRGGMPMRGDRGGMMGRGGMMGRGGMGRGGDRGGFMPRGGPRGMGR--------GGPTGGNM 492

  Fly   273 QPRDGDWKCNS--CNNTNFAWRNECNRCKTPKGDDEG-----SSGGGGGGGYGGGGGGGGYDRGN 330
            |.|.|||:|.:  |.|.|||||.|||:||.||.:..|     ..|..|.||.||..||.|.|||.
Zfish   493 QQRAGDWQCPNAGCGNQNFAWRMECNQCKAPKPEGFGPPPFPPGGDRGRGGPGGMRGGRGMDRGG 557

  Fly   331 DRGSGG--GGYHNRDRGGNSQGGGGGGGGGGGYSRFNDNNGG------GRGGRGGGGGNRRD-GG 386
            ..|.||  || ...|||| .:|.|...||.||..|     ||      ||.|||.|...:.| .|
Zfish   558 PGGPGGFRGG-RGVDRGG-FRGRGMDRGGFGGRGR-----GGPPMDDMGRRGRGMGPPGKMDMKG 615

  Fly   387 PMRNDGGMRSRPY 399
            ..|.|  .|.|||
Zfish   616 DHRQD--RRERPY 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cazNP_523365.2 RRM <118..>205 CDD:223796 36/90 (40%)
RRM_SARFH 122..204 CDD:240978 33/81 (41%)
zf-RanBP 275..304 CDD:279035 19/30 (63%)
RanBP2-type Zn finger 279..298 CDD:275375 12/20 (60%)
ewsr1aNP_001108610.1 RRM <329..>431 CDD:223796 39/103 (38%)
RRM_EWS 346..429 CDD:240977 33/82 (40%)
zf-RanBP 495..525 CDD:279035 18/29 (62%)
RanBP2-type Zn finger 499..520 CDD:275375 12/20 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588237
Domainoid 1 1.000 88 1.000 Domainoid score I7897
eggNOG 1 0.900 - - E1_KOG1995
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 292 1.000 Inparanoid score I2767
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1539664at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24413
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23238
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X712
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.860

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