DRSC/TRiP Functional Genomics Resources

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Protein Alignment caz and Taf15

DIOPT Version :9

Sequence 1:NP_523365.2 Gene:caz / 32587 FlyBaseID:FBgn0285954 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001099294.2 Gene:Taf15 / 287571 RGDID:1309595 Length:572 Species:Rattus norvegicus


Alignment Length:509 Identity:176/509 - (34%)
Similarity:220/509 - (43%) Gaps:166/509 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YGGGSGQGYNNFAVPPPNYQQMPNKTGNY-NEPPPNYGKQGGGYDSGSGHRGSGGSGNGGGGGGS 69
            |||.||.|.|.     ..|.|   ..|:| |:...:||:|  .|:    ::|...:.:.||.||.
  Rat    50 YGGYSGYGQNQ-----SGYSQ---SYGSYENQKQSSYGQQ--SYN----NQGQQNTESSGGQGGR 100

  Fly    70 WNDRGGNSYGNGGA---------------------SKDSY------------------------- 88
            ....|.:.||...:                     ..|||                         
  Rat   101 APSYGQSDYGQQDSYDQQSGYDQHQGSYDEQSNYQQHDSYNQNQQSYHPQRENYSHHTQDDRRDM 165

  Fly    89 ------NKGHGGYSGGGGGGGG----GGG---GGSGGN-----------------DMITQED--- 120
                  |:|:||..|||.|.||    |.|   |.|||:                 |..::.|   
  Rat   166 SRYGEDNRGYGGSQGGGRGRGGYDKDGRGPMTGSSGGDRGGFKNFGGHRDYGPRPDADSESDNSD 230

  Fly   121 --TIFVSGMDPSTTEQDIETHFGAIGIIKKDKRTMKPKIWLYKNKETGASKGEATVTYDDTNAAQ 183
              ||||.|:....:...:...|..|||||.:|:|.||.|.||.:|:||..||||||::||..:|:
  Rat   231 NNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVSFDDPPSAK 295

  Fly   184 SAIEWFDGRDFNGNAIKVSLAQRQNNWNKGGGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDR 248
            :||:||||::|:||.||||.|.|:..:.:|||.|||..||||:.||.|..|.||           
  Rat   296 AAIDWFDGKEFHGNIIKVSFATRRPEFMRGGGSGGGRRGRGGYRGRGGFQGRGG----------- 349

  Fly   249 GGGGGGGRYDRGGGGGGGGGGGNVQPRDGDWKC--NSCNNTNFAWRNECNRCKTPKGDDEGSSGG 311
                                    .|::|||.|  .||.|.|||.||.||:|..|:.:|...|||
  Rat   350 ------------------------DPKNGDWVCPNPSCGNMNFARRNSCNQCNEPRPEDSRPSGG 390

  Fly   312 G-GGGGYGG-----GGGGGGYDRGN---DRGSGG------GGYHNRDR-----GGNSQGGGGGGG 356
            . .|.||||     |.||.|.|||.   ||..||      ||.:..||     ||:..|||.||.
  Rat   391 DFRGRGYGGERGFRGRGGRGGDRGGYGADRSGGGYGGDRSGGSYGADRSGGGYGGDRSGGGYGGD 455

  Fly   357 GGGGYSRFNDNNGGGRGG------------RGGGGGNRRD-GGPMRNDGGMRSR 397
            .||||.......||.|||            |||.||:|.. ||.....||.|||
  Rat   456 RGGGYGGDRGGYGGDRGGSYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSR 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cazNP_523365.2 RRM <118..>205 CDD:223796 44/91 (48%)
RRM_SARFH 122..204 CDD:240978 42/81 (52%)
zf-RanBP 275..304 CDD:279035 16/30 (53%)
RanBP2-type Zn finger 279..298 CDD:275375 12/20 (60%)
Taf15NP_001099294.2 PTZ00110 4..>69 CDD:240273 9/26 (35%)
ser_rich_anae_1 <21..>158 CDD:411418 27/121 (22%)
RRM_FUS_TAF15 230..315 CDD:409951 42/84 (50%)
zf-RanBP 352..382 CDD:395516 16/29 (55%)
RanBP2-type Zn finger 356..377 CDD:275376 12/20 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346788
Domainoid 1 1.000 87 1.000 Domainoid score I7805
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 296 1.000 Inparanoid score I2653
OMA 1 1.010 - - QHG49372
OrthoDB 1 1.010 - - D1539664at2759
OrthoFinder 1 1.000 - - FOG0002238
OrthoInspector 1 1.000 - - otm45259
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23238
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X712
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.010

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