DRSC/TRiP Functional Genomics Resources

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Protein Alignment caz and drr-2

DIOPT Version :9

Sequence 1:NP_523365.2 Gene:caz / 32587 FlyBaseID:FBgn0285954 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_499818.1 Gene:drr-2 / 259546 WormBaseID:WBGene00011730 Length:207 Species:Caenorhabditis elegans


Alignment Length:160 Identity:60/160 - (37%)
Similarity:85/160 - (53%) Gaps:18/160 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 FVSGMDPSTTEQDIETHFGAIGIIK----KDKRTMKPKIWLYKNKETGASKGEATVTYDDTNAAQ 183
            |:.|:...:...||||      |:|    .|:...|..|.|..::::|:.||.|.||:::.....
 Worm     9 FIGGLPYDSIATDIET------ILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMN 67

  Fly   184 SAIEWFDGRDFNGNAIKVSLAQRQNNWNKGGGGGGGGGGRGGFGGRRGGGGGGGGGGGGGGRFDR 248
            :||...:|.||....:||:.||:::..::|||.||.||..|..|| ||.|.||...||.||||:.
 Worm    68 TAISGLNGADFGNRVLKVNRAQQRDRSDRGGGRGGRGGNFGDRGG-RGRGAGGFRRGGEGGRFNE 131

  Fly   249 GGGGGGGRYDRGGGGGGGGGGGNVQPRDGD 278
            |       ..|||.||||..||..|.|:.:
 Worm   132 G-------ERRGGFGGGGHRGGYRQRRESE 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cazNP_523365.2 RRM <118..>205 CDD:223796 25/85 (29%)
RRM_SARFH 122..204 CDD:240978 25/84 (30%)
zf-RanBP 275..304 CDD:279035 1/4 (25%)
RanBP2-type Zn finger 279..298 CDD:275375 60/160 (38%)
drr-2NP_499818.1 RRM_SF 6..88 CDD:388407 25/84 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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