DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4 and PUP3

DIOPT Version :9

Sequence 1:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_011020.3 Gene:PUP3 / 856830 SGDID:S000000896 Length:205 Species:Saccharomyces cerevisiae


Alignment Length:225 Identity:40/225 - (17%)
Similarity:83/225 - (36%) Gaps:39/225 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GSTAVGVRGANCVVLGVEKKSVAQ-LQEDRKVRKICMLDNHVVMAFAGLTADARIMINRAQVECQ 94
            |...|.:.|.:||.:..:.:..:| |....|..||... .||.:...||..|...:....:.:..
Yeast     9 GGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHY-GHVFLGITGLATDVTTLNEMFRYKTN 72

  Fly    95 SHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDA-DGSAHLFQTEPSGIFYEY 158
            .::|..|..:..|..|:.::  ...|.:..|  |:.:..::.|.:: .|...:...:..|...|.
Yeast    73 LYKLKEERAIEPETFTQLVS--SSLYERRFG--PYFVGPVVAGINSKSGKPFIAGFDLIGCIDEA 133

  Fly   159 K-----ANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRALLEVAQSGQNNLEVAIMENGKP 218
            |     ..|:.:...:....:|.:...|::      .:...:|||..|                 
Yeast   134 KDFIVSGTASDQLFGMCESLYEPNLEPEDL------FETISQALLNAA----------------- 175

  Fly   219 LKMLDTDVITDYVKIIEKEKEEELEKKKQK 248
                |.|.::.:..::...|::|:.|:..|
Yeast   176 ----DRDALSGWGAVVYIIKKDEVVKRYLK 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4NP_525092.1 PRK03996 5..231 CDD:235192 36/206 (17%)
proteasome_alpha_type_7 5..213 CDD:239724 34/188 (18%)
PUP3NP_011020.3 proteasome_beta_type_3 8..201 CDD:239728 39/223 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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