DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4 and PRE6

DIOPT Version :9

Sequence 1:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_014604.1 Gene:PRE6 / 854119 SGDID:S000005398 Length:254 Species:Saccharomyces cerevisiae


Alignment Length:253 Identity:135/253 - (53%)
Similarity:186/253 - (73%) Gaps:9/253 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDR----KVRK 63
            |.||||::|||||||:.|||||.|||::|:.||||:|.||||||.|::|..:||:.|    ||.|
Yeast     2 SGYDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSK 66

  Fly    64 ICMLDNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRP 128
            |   |:|||::|:||.||:||:|.:|:||.|||||.:|||||:||:||::|.::|:||||.|.||
Yeast    67 I---DSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRP 128

  Fly   129 FGISCLIGGFD-ADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSY-REEEVANEHGAVK 191
            ||:|.||.||| .|....|:|||||||:..:.|...||::|.||||.||:| |:|..|.....||
Yeast   129 FGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVK 193

  Fly   192 LAIRALLEVAQSGQNNLEVAIMENGKPLKMLDTDVITDYVKIIEKEKEEELEKKKQKK 249
            |.:|:||||.|:|..|:|:.:::....:..|.::.|..||..||:||:|:.|:.|:||
Yeast   194 LTVRSLLEVVQTGAKNIEITVVKPDSDIVALSSEEINQYVTQIEQEKQEQQEQDKKKK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4NP_525092.1 PRK03996 5..231 CDD:235192 123/231 (53%)
proteasome_alpha_type_7 5..213 CDD:239724 121/213 (57%)
PRE6NP_014604.1 proteasome_alpha_type_7 4..215 CDD:239724 121/213 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345389
Domainoid 1 1.000 202 1.000 Domainoid score I553
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2086
Inparanoid 1 1.050 264 1.000 Inparanoid score I615
Isobase 1 0.950 - 0 Normalized mean entropy S208
OMA 1 1.010 - - QHG62217
OrthoFinder 1 1.000 - - FOG0002043
OrthoInspector 1 1.000 - - otm46601
orthoMCL 1 0.900 - - OOG6_101207
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2243
SonicParanoid 1 1.000 - - X1345
TreeFam 1 0.960 - -
1615.740

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