DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4 and PUP2

DIOPT Version :9

Sequence 1:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_011769.1 Gene:PUP2 / 853168 SGDID:S000003485 Length:260 Species:Saccharomyces cerevisiae


Alignment Length:254 Identity:94/254 - (37%)
Similarity:139/254 - (54%) Gaps:20/254 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICML 67
            |.|||.|:.|||:|.|.||||:.||::.||||:|:.....|||||||::.:.|.|...:.||..:
Yeast     6 SEYDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEI 70

  Fly    68 DNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQ-SNGR----- 126
            |.|:..|.:|||||||.||..|:....:|.|..::.:.:|.:|:.:..|..::.: ::|.     
Yeast    71 DRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMS 135

  Fly   127 RPFGISCLIGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANE-HGAV 190
            ||||::.||.|.|||....||..||||.||.|.|.|.|..::..         :.|:.|| |.::
Yeast   136 RPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGA---------QAELLNEWHSSL 191

  Fly   191 KLAIRALLEVAQSGQNNLEVAIMENGKPLKMLDTDVITDYVKIIEKEKEEELEKKKQKK 249
            .|....|| |.:..:..:|..:.||...|..:...   |..||.:.||..||.|:.::|
Yeast   192 TLKEAELL-VLKILKQVMEEKLDENNAQLSCITKQ---DGFKIYDNEKTAELIKELKEK 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4NP_525092.1 PRK03996 5..231 CDD:235192 85/232 (37%)
proteasome_alpha_type_7 5..213 CDD:239724 81/214 (38%)
PUP2NP_011769.1 proteasome_alpha_type_5 8..222 CDD:239722 84/223 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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