DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4 and psma6l

DIOPT Version :9

Sequence 1:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_571870.2 Gene:psma6l / 83917 ZFINID:ZDB-GENE-010502-2 Length:252 Species:Danio rerio


Alignment Length:244 Identity:71/244 - (29%)
Similarity:119/244 - (48%) Gaps:11/244 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIFSPDGHLLQVEYAQEAV-RKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICMLD 68
            :||.:|||||:|.|.|||||.:|: :.|.|.||:||.:|.||..:||....|.:...:..:..:.
Zfish     9 FDRHITIFSPEGRLYQVEYAFKAISQSGLTTVGIRGVDCAVLVTQKKVSDTLLDASTMTNMFRIT 73

  Fly    69 NHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISC 133
            ..:.....|..||:|..::||::|....:......|.::.:.|.:|.|.|.|||:...||.|...
Zfish    74 PRIGCVMTGHYADSRSQVHRARIEAGEWKYKFGYDVPVDALCRRLADLSQVYTQNAEMRPLGCCM 138

  Fly   134 LIGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEH------GAVKL 192
            ::...|......|::.:|:|.|..::|.:.|........:.||..::.:...|.      .:|::
Zfish   139 MLISMDPQKGPMLYKCDPAGYFCGFRATSVGVKHTEANSYLEKKIKKMQKKKEEVELDFDSSVQM 203

  Fly   193 AIRALLEV--AQSGQNNLEVAIM--ENGKPLKMLDTDVITDYVKIIEKE 237
            ||..|..|  .......||||::  ||.|...:.:.::....|.|.|:|
Zfish   204 AISCLSSVLCMDFKCTELEVAVVTKENPKFRTLSEVEIERHLVAIAERE 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4NP_525092.1 PRK03996 5..231 CDD:235192 67/236 (28%)
proteasome_alpha_type_7 5..213 CDD:239724 64/216 (30%)
psma6lNP_571870.2 PRE1 7..252 CDD:223711 70/242 (29%)
proteasome_alpha_type_6 8..226 CDD:239723 64/216 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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