DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha4 and PAD2

DIOPT Version :9

Sequence 1:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_201415.1 Gene:PAD2 / 836746 AraportID:AT5G66140 Length:250 Species:Arabidopsis thaliana


Alignment Length:248 Identity:146/248 - (58%)
Similarity:181/248 - (72%) Gaps:9/248 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICML 67
            :|||||:|:|||||||.|||||.||||||:.||||||.:.|||.|||||..:||:.|..|||..|
plant     2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSL 66

  Fly    68 DNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGIS 132
            |||:.:|.|||.||||::||:|::|||||||.:|||||:|||||:||.|:||||||.|.||||:|
plant    67 DNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLS 131

  Fly   133 CLIGGFDA-DGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRA 196
            .||.|||. .....|:||:|||.|..:|||||||::..:|||.||:|:|   ::....:||||||
plant   132 TLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKE---SSGQETIKLAIRA 193

  Fly   197 LLEVAQSGQNNLEVAIM---ENGKPLKMLDTDVITDYVKIIEKEKEEELEKKK 246
            ||||.:||..|:|||:|   |.|  |:.|:...|...|..||.||......||
plant   194 LLEVVESGGKNIEVAVMTREETG--LRQLEEAEIDAIVAKIEAEKAAAEAAKK 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4NP_525092.1 PRK03996 5..231 CDD:235192 138/229 (60%)
proteasome_alpha_type_7 5..213 CDD:239724 132/208 (63%)
PAD2NP_201415.1 PRK03996 1..229 CDD:235192 139/231 (60%)
proteasome_alpha_type_7 4..210 CDD:239724 132/208 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 220 1.000 Domainoid score I721
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2086
Inparanoid 1 1.050 270 1.000 Inparanoid score I920
OMA 1 1.010 - - QHG62217
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 1 1.000 - - FOG0002043
OrthoInspector 1 1.000 - - mtm1115
orthoMCL 1 0.900 - - OOG6_101207
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1345
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.