DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4 and PSMB5

DIOPT Version :10

Sequence 1:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_002788.1 Gene:PSMB5 / 5693 HGNCID:9542 Length:263 Species:Homo sapiens


Alignment Length:186 Identity:32/186 - (17%)
Similarity:73/186 - (39%) Gaps:33/186 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GSTAVGVRGANCVVLGVEKKSVAQLQ-EDRKVRKICMLDNHVVMAFAGLTADARIMINRAQVECQ 94
            |:|.:..:..:.|::..:.::.|... ..:.|:|:..::.:::...||..||..........:|:
Human    59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCR 123

  Fly    95 SHRLNVEDPVTLEYITRFIAQLKQK-----------------------YTQSNGRRPFGISCLIG 136
            .:.|..::.:::...::.:|.:..:                       |..|.|.|..|.:..:|
Human   124 IYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSVG 188

  Fly   137 GFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKL 192
                .||.:.:.....|..|:.:.......|:  |..::.:||:   |...|||.|
Human   189 ----SGSVYAYGVMDRGYSYDLEVEQAYDLAR--RAIYQATYRD---AYSGGAVNL 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4NP_525092.1 proteasome_alpha_type_7 5..213 CDD:239724 32/186 (17%)
PSMB5NP_002788.1 proteasome_beta_type_5 60..247 CDD:239730 31/185 (17%)

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