DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4 and PSMA1

DIOPT Version :10

Sequence 1:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_683877.1 Gene:PSMA1 / 5682 HGNCID:9530 Length:269 Species:Homo sapiens


Alignment Length:253 Identity:86/253 - (33%)
Similarity:141/253 - (55%) Gaps:19/253 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICML 67
            ::||..||::||.|.:.|:|||.|||::||..||::.....||...|::.::|...:|  ||..:
Human    10 NQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQK--KILHV 72

  Fly    68 DNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGIS 132
            |||:.::.||||||||::.|..:.||...|...:.|:.:..:...|....|..||..||||:|:.
Human    73 DNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVG 137

  Fly   133 CLIGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRAL 197
            .||.|:| |...|:|||.||..:::.:|.:.|..::..|.:.|:...|....|.:..||..:|||
Human   138 LLIAGYD-DMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRAL 201

  Fly   198 LEVAQSGQN----NLEVAIMENGKPLK--MLDTDVITDYVKIIEKEKEEELEKKKQKK 249
            .|...:.|:    |:.:.|:  ||.|:  :.|.|.::.::        |.||::.|:|
Human   202 RETLPAEQDLTTKNVSIGIV--GKDLEFTIYDDDDVSPFL--------EGLEERPQRK 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4NP_525092.1 proteasome_alpha_type_7 5..213 CDD:239724 75/211 (36%)
PSMA1NP_683877.1 proteasome_alpha_type_1 12..222 CDD:239718 76/214 (36%)

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