DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4 and psma3

DIOPT Version :10

Sequence 1:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001011257.1 Gene:psma3 / 496707 XenbaseID:XB-GENE-976787 Length:255 Species:Xenopus tropicalis


Alignment Length:247 Identity:83/247 - (33%)
Similarity:128/247 - (51%) Gaps:23/247 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICMLDN 69
            ||.:.:.|||||.:.|||||.:||...|||:|:|..:.||.||||..:::|.|:...::|..:|.
 Frog     8 YDLSASTFSPDGRVFQVEYAAKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRIFNVDR 72

  Fly    70 HVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCL 134
            ||.||.|||.||||.:.:.|:.|..:.|.|....:.|::::..:|.....||..:..||||.|.:
 Frog    73 HVGMAVAGLLADARSLADIAREEASNFRANYGYDIPLKHLSDRVAMYVHAYTLYSAVRPFGCSFM 137

  Fly   135 IGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREE----EVANEHGAVKLAIR 195
            :|.::.|..|.|:..:||||.|.|...|.|::.:..:...||...::    :|..|   |...|.
 Frog   138 LGSYNEDDGAQLYMVDPSGISYGYWGCAIGKAKQAAKTEIEKLQMKDMTCRDVVKE---VAKIIY 199

  Fly   196 ALLEVAQSGQNNLE---VAIMENGKPLKMLDTDVITDYVKIIEKEKEEELEK 244
            .:.:..:.....||   |..:.|||.             :|:.|:..||.||
 Frog   200 IVHDEVKDKSFELELSWVGKITNGKH-------------EIVPKDIREEAEK 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4NP_525092.1 proteasome_alpha_type_7 5..213 CDD:239724 74/214 (35%)
psma3NP_001011257.1 proteasome_alpha_type_3 5..217 CDD:239720 73/211 (35%)

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