DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4 and Prosalpha3T

DIOPT Version :9

Sequence 1:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster


Alignment Length:244 Identity:75/244 - (30%)
Similarity:122/244 - (50%) Gaps:25/244 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDR-KVRKI 64
            |:..:|...|||||:|.|.|||||.||..:..|.||:...|.|:|..| :||.:|.:.. .|.:|
  Fly     1 MARFFDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATE-RSVDKLMDTSIPVPRI 64

  Fly    65 CMLDNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPF 129
            ..|:.::.....|.|||..:::|:.::..|.::.|..:.:..|.:...:..:||.|||..|:|||
  Fly    65 SWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPF 129

  Fly   130 GISCLIGGFDADGSAHLFQTEPSGIFYEYKANATGRSA-----KVVREFFEKSYREEEVANEHGA 189
            |:|.|..|:|......|:|::|||.:..:||...||.:     .:.:|.|.|.|....|..   |
  Fly   130 GVSFLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEE---A 191

  Fly   190 VKLAIRAL-------------LEVA--QSGQNNLEVAIMENGKPLKMLD 223
            ..:||:.:             ||:|  |...|.....|:|..:..::::
  Fly   192 KDVAIKVMGMTLGRDSLTPEKLEIAFVQRYGNTTVFHILEKNEIHRLIE 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4NP_525092.1 PRK03996 5..231 CDD:235192 74/240 (31%)
proteasome_alpha_type_7 5..213 CDD:239724 72/228 (32%)
Prosalpha3TNP_651843.1 PTZ00246 1..241 CDD:173491 75/244 (31%)
Ntn_hydrolase 3..218 CDD:294319 70/218 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441091
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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