DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha4 and Prosbeta2

DIOPT Version :9

Sequence 1:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster


Alignment Length:227 Identity:48/227 - (21%)
Similarity:91/227 - (40%) Gaps:32/227 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RKGSTAVGVRGANCVVLGVEKKSV-AQLQEDRKVRKICMLDNHVVMAFAGLTADARIMINRAQVE 92
            :.|:|.||:...:.|:||.:.::. ..:..|:...||..|..::....||..||..:..:....:
  Fly    37 KTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQ 101

  Fly    93 CQSHRLNVEDPVTLEYITRFIA---QLKQKYTQSNGRRPFGISCLIGGFDADGSAHLFQTEPSGI 154
            .:.|||..:..|      |.:|   .|||...:..|.  ...:.::||.|..| .|::...|.|.
  Fly   102 LELHRLQTDREV------RVVAANTMLKQMLFRYQGH--ISAALVLGGVDKTG-PHIYSIHPHGS 157

  Fly   155 FYEYKANATGRSAKVVREFFEKSYREEEVANEHG--AVKLAIRALLEVAQSGQNNLEVAIMENGK 217
            ..:......|..:......||..:: .:::.|.|  .|:.||.:.:.......:|:::.::..|.
  Fly   158 SDKLPYATMGSGSLAAMTVFESRWK-PDLSEEEGKKLVRDAIASGVFNDLGSGSNIDLCVIRKGS 221

  Fly   218 PLKMLDTDVITDYVKIIEKEKEEELEKKKQKK 249
                            :|..:..||..||.|:
  Fly   222 ----------------VEYLRNYELANKKGKR 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4NP_525092.1 PRK03996 5..231 CDD:235192 42/207 (20%)
proteasome_alpha_type_7 5..213 CDD:239724 41/189 (22%)
Prosbeta2NP_524076.2 PRE1 42..232 CDD:223711 43/215 (20%)
proteasome_beta_type_7 42..228 CDD:239732 41/211 (19%)
Pr_beta_C 232..264 CDD:289249 3/6 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441105
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.