DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4 and Psma4

DIOPT Version :10

Sequence 1:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_036096.1 Gene:Psma4 / 26441 MGIID:1347060 Length:261 Species:Mus musculus


Alignment Length:259 Identity:82/259 - (31%)
Similarity:147/259 - (56%) Gaps:17/259 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKV-RKI 64
            ||.|||...|||||:|.|.|||||.||:....|.:|:...:.|:|..|::::.:|.::... .||
Mouse     1 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKI 65

  Fly    65 CMLDNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPF 129
            ..|:..:..:.||:|:||.::.|..::..|.:.|..::|:..|.:...:..:||.|||..|:|||
Mouse    66 YKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPF 130

  Fly   130 GISCLIGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAI 194
            |:|.|..|:|......|:|::|||.:..:||...|.::.......::.|:|.|:..: .|:.||:
Mouse   131 GVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLK-SALALAV 194

  Fly   195 RAL---LEVAQSGQNNLEVAIM--ENGKP----LKMLDTDVITDYVKIIEKEKEEELEKKKQKK 249
            :.|   ::|::.....:|:|.:  |:||.    ||..:.:      ::|:|.:|||.:.:::||
Mouse   195 KVLNKTMDVSKLSAEKVEIATLTRESGKTVIRVLKQKEVE------QLIKKHEEEEAKAEREKK 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4NP_525092.1 proteasome_alpha_type_7 5..213 CDD:239724 67/211 (32%)
Psma4NP_036096.1 proteasome_alpha_type_4 3..216 CDD:239721 68/213 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..261 5/13 (38%)

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