DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4 and pre6

DIOPT Version :9

Sequence 1:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_595165.1 Gene:pre6 / 2540175 PomBaseID:SPBC106.16 Length:259 Species:Schizosaccharomyces pombe


Alignment Length:245 Identity:130/245 - (53%)
Similarity:185/245 - (75%) Gaps:3/245 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICML 67
            |.||||:::|||||.||||||.|||||:|:||:.:||..|:|:|||:|:|.:||.....:||.|:
pombe     2 SGYDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKIAMV 66

  Fly    68 DNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGIS 132
            ||||.:|||||.|||||:|::|:||.|:|:||:.|||::||:||::|.::||||||.|.||||:|
pombe    67 DNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVS 131

  Fly   133 CLIGGFD-ADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRA 196
            .||.||| .|.:..::||||:||:..:||.|.||::|..||:.||:::|....:|  .:.||:.:
pombe   132 TLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLSRDE--TIHLAVSS 194

  Fly   197 LLEVAQSGQNNLEVAIMENGKPLKMLDTDVITDYVKIIEKEKEEELEKKK 246
            ||||.|:...|:|:|||:.||.::.|.:|.|...||.|:.|||.|..:||
pombe   195 LLEVVQTASGNIELAIMDPGKDVEFLHSDKIDTIVKEIQDEKEAEAARKK 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4NP_525092.1 PRK03996 5..231 CDD:235192 120/226 (53%)
proteasome_alpha_type_7 5..213 CDD:239724 113/208 (54%)
pre6NP_595165.1 PRK03996 1..232 CDD:235192 123/231 (53%)
proteasome_alpha_type_7 4..211 CDD:239724 113/208 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 201 1.000 Domainoid score I650
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2086
Inparanoid 1 1.050 265 1.000 Inparanoid score I730
OMA 1 1.010 - - QHG62217
OrthoFinder 1 1.000 - - FOG0002043
OrthoInspector 1 1.000 - - otm47071
orthoMCL 1 0.900 - - OOG6_101207
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2243
SonicParanoid 1 1.000 - - X1345
TreeFam 1 0.960 - -
1413.860

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