DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4 and Prosalpha1R

DIOPT Version :10

Sequence 1:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster


Alignment Length:251 Identity:72/251 - (28%)
Similarity:124/251 - (49%) Gaps:17/251 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSRYDRAVTIFSPDGHLLQVEYAQEAV-RKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKIC 65
            |:.:||.:|||||:|.|.|||||.:|: ::..|.|.::..:|.|:..:||...:......|..:.
  Fly     6 SAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLF 70

  Fly    66 MLDNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFG 130
            .:...:..|..|..||:|..:.:|:.|..:.|......:.::.:.|.||.:.|.|||:...||.|
  Fly    71 RITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLG 135

  Fly   131 ISCLIGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIR 195
            .|.::..:|.:....:::|:|:|.|..:||.:.|........:.||.|:..  .:|..|::|||.
  Fly   136 CSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPN--LSEEKAIQLAIS 198

  Fly   196 ALLEV--AQSGQNNLEVAIMENGKP-LKMLDTDVITDYVKIIEKEKEEELEKKKQK 248
            .|..|  .....|.:|:.::....| .::||           |:|.||.|.|..:|
  Fly   199 CLSSVLAIDFKPNGIEIGVVSKSDPTFRILD-----------EREIEEHLTKIAEK 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4NP_525092.1 proteasome_alpha_type_7 5..213 CDD:239724 61/210 (29%)
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 61/211 (29%)

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