DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha4 and pas-7

DIOPT Version :10

Sequence 1:NP_525092.1 Gene:Prosalpha4 / 32584 FlyBaseID:FBgn0004066 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_496177.2 Gene:pas-7 / 174571 WormBaseID:WBGene00003928 Length:250 Species:Caenorhabditis elegans


Alignment Length:246 Identity:73/246 - (29%)
Similarity:123/246 - (50%) Gaps:11/246 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICMLDN 69
            ||.|.:.|||||.:.||||||:||....|.:.:||.|.||:..:|...::|..|....::..:::
 Worm     8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVND 72

  Fly    70 HVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCL 134
            :|.:|.||...|...:.|.|..|......:..:|:.::.|...:|:....:|.... ||||....
 Worm    73 NVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTLGIS-RPFGAGAF 136

  Fly   135 IGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRALLE 199
            ...::......||..||||:.|||||.|.|:..:..:...||...||...|:  .||.|.|.::.
 Worm   137 FMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLKIEELDVNQ--LVKEAARIIMV 199

  Fly   200 VAQSGQN-NLEVAI-----MENGKPLKMLDTDVITDYVK-IIEKEKEEELE 243
            |....:: |:::.:     ..||| .:.:.::|:|...: .|.|..|::::
 Worm   200 VRDENKDKNVQIEMGWVGEQTNGK-YEEVPSEVVTAAEEWAIAKLDEDDMD 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha4NP_525092.1 proteasome_alpha_type_7 5..213 CDD:239724 65/213 (31%)
pas-7NP_496177.2 proteasome_alpha_type_3 5..216 CDD:239720 65/210 (31%)

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