DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mfe2 and hsd17b4

DIOPT Version :10

Sequence 1:NP_573109.1 Gene:Mfe2 / 32582 FlyBaseID:FBgn0030731 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_001027490.1 Gene:hsd17b4 / 613082 XenbaseID:XB-GENE-1010432 Length:740 Species:Xenopus tropicalis


Alignment Length:619 Identity:299/619 - (48%)
Similarity:408/619 - (65%) Gaps:37/619 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA 72
            ||:||||.:|||||.||||.|||.||||||.|:||||||...|:|.|..|||.||:|||..||:|
 Frog     6 LRFDGRVVLVTGAGGGLGRTYALAFAERGASVIVNDLGGDIKGEGKSSSAADKVVEEIRAKGGKA 70

  Fly    73 VADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAA 137
            ||:|:||..|.|:::||:.||||:||:|||||||||||..:.|:.||::::.|||||:|..|:||
 Frog    71 VANYDSVEAGEKLVQTALDAFGRIDIVVNNAGILRDRSFARISDADWDIIHRVHLKGAFLITRAA 135

  Fly   138 FPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASR 202
            :.:||.|.:||||||||.:||||||||.||:|||:||:||:||:||||.:.|:..|.|.|||.||
 Frog   136 WNHMKNQKFGRIIMTSSAAGIYGNFGQANYSAAKLGLVGLSNTLAIEGTKYNIHSNCIAPTAGSR 200

  Fly   203 MTEGILPDILFNELKPKLIAPVVAYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDP 267
            :|:.::|..|.:.|||:.:.|:|.:||||||::.||..|..|||..||...|..||::|.. :.|
 Frog   201 LTQTVMPQDLLDALKPEYVTPLVLWLCHESCQETGSLFEVGAGWVGKLRWERSLGAIIRQK-NRP 264

  Fly   268 VTIEYVKDVWSNVTDMSKAKHLGAIAEASGTLLEVLEKLKEGGG-----------------DAIE 315
            :|.|.|:|.|:.::|...|.....|.::...|.:||.:.....|                 |.::
 Frog   265 MTPEAVRDEWAKISDFDNADKPQTIQDSINPLYQVLSQTDSEKGMSMNPTSQGTSLSTSSIDPVK 329

  Fly   316 --------DAFEFNSKELITYALGIGASVKNAKDMRFLYENDADFAAIPTFFVLPGLLLQMSTDK 372
                    ..:.::..|.|.||||:|.|.::...::||||...||:.:|:|.|:      :|...
 Frog   330 AIGQKLPLTTYTYSHLEPILYALGVGMSTRDPDHLKFLYEGSEDFSCLPSFGVI------VSQAA 388

  Fly   373 LLSKAL---PNSQVDFSNILHGEQYLEIVDDLPTSGTLLTNGKVFDVMDKGSGAVVVTNSESFDE 434
            .:|..|   |...:||:.:|||||||||...|||||.:.::..|.|:|||||||:::.:..:: .
 Frog   389 FMSGGLASVPGLNIDFTRVLHGEQYLEIYKPLPTSGEMTSHATVADIMDKGSGAIILLDVHTY-H 452

  Fly   435 SGRLLVRNQSTTFIVGAGKFGGKKDPIAGVVPLQPAPNRQPDATVQYTTSEDQAALYRLSGDKNP 499
            ...|:..||.:.|:||||.||||:..........| |:|.||..|...|:.|||||||||||.||
 Frog   453 GVDLVCYNQFSVFVVGAGGFGGKRSSSKAKATANP-PSRPPDVVVTDATNADQAALYRLSGDWNP 516

  Fly   500 LHIDPQMALLAGFKTPILHGLCTLGFSVRAVLAQFADNNPALFKAVKVRFSGPVIPGQTLRVDLW 564
            |||||..|.:.||:.|||||||:.|||.|.||..||:|:...|||:||||:.||:|||||:.::|
 Frog   517 LHIDPSFAAMGGFEKPILHGLCSFGFSARHVLKHFANNDVTKFKAIKVRFAKPVLPGQTLQTEMW 581

  Fly   565 KQGTRINFRTVVVETGKEVISGAYVDLKSSQAKL 598
            |:|.||..:|.|.:||:..|:||||||.|::..|
 Frog   582 KEGNRIFLQTKVKDTGEIAIAGAYVDLTSTENNL 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mfe2NP_573109.1 hydroxyacyl-CoA-like_DH_SDR_c-like 8..257 CDD:187611 148/248 (60%)
PLN02864 315..598 CDD:178455 133/293 (45%)
hsd17b4NP_001027490.1 hydroxyacyl-CoA-like_DH_SDR_c-like 6..255 CDD:187611 148/248 (60%)
PLN02864 318..615 CDD:178455 134/304 (44%)
SCP2 632..735 CDD:460423
Blue background indicates that the domain is not in the aligned region.

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