DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mfe2 and Rdh1

DIOPT Version :10

Sequence 1:NP_573109.1 Gene:Mfe2 / 32582 FlyBaseID:FBgn0030731 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_610310.2 Gene:Rdh1 / 35708 FlyBaseID:FBgn0033205 Length:330 Species:Drosophila melanogaster


Alignment Length:340 Identity:83/340 - (24%)
Similarity:130/340 - (38%) Gaps:86/340 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GKLRYD----GRVAVVTGAGAGLGREYALLFAERGAKVVV------------NDLGGTHSGDGAS 54
            ||...|    |:|.:||||..|:|:|.||..|.||..|.:            .|:....:.....
  Fly    33 GKFTKDTDETGKVFIVTGANTGIGKETALEIARRGGTVYLACRDMNRCEKARKDIIKETNNQNIF 97

  Fly    55 QRAADI-VVDEIRKAGGEAVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQD 118
            .|..|: .:|.|||           .:||.|      |...::.:|:||||::|   ..||..:|
  Fly    98 SRELDLSSLDSIRK-----------FVDGFK------KEQPKLHVLINNAGVMR---CPKTLTKD 142

  Fly   119 -WNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVA 182
             :.|...|:..|.|..|......:|.....||::.||.:...|:....:..:.|....|||.:  
  Fly   143 GYELQLGVNHIGHFLLTNLLLDVLKNSAPSRIVVVSSLAHARGSINVADLNSEKSYDEGLAYS-- 205

  Fly   183 IEGARNNVLCNVIVPTAASRMTEGILPDILFNELKPKLIAPVVAYLCHESCEDNGSYIES----- 242
                 .:.|.||:.....::..||  ..:..|.|.|.::...:|        .|.::.::     
  Fly   206 -----QSKLANVLFTRELAKRLEG--SGVTVNALHPGVVDTELA--------RNWAFFQTNLVKF 255

  Fly   243 -------------AAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKD-----VWSNVTDMSKAKHL 289
                         .:|..|.::      |.|.|.|.: ::..|..|     |.|...|...||.|
  Fly   256 FLKPMIWPLLKTPKSGAQTSIY------AALDPELKN-ISGLYFSDCKPKPVASGALDDKVAKFL 313

  Fly   290 GAIAEASGTLLEVLE 304
            .|.:| ..|.|:.||
  Fly   314 WAESE-KWTGLDKLE 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mfe2NP_573109.1 hydroxyacyl-CoA-like_DH_SDR_c-like 8..257 CDD:187611 63/284 (22%)
PLN02864 315..598 CDD:178455
Rdh1NP_610310.2 Rossmann-fold NAD(P)(+)-binding proteins 43..317 CDD:473865 75/317 (24%)
Blue background indicates that the domain is not in the aligned region.

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