DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mfe2 and Ldsdh1

DIOPT Version :10

Sequence 1:NP_573109.1 Gene:Mfe2 / 32582 FlyBaseID:FBgn0030731 Length:598 Species:Drosophila melanogaster
Sequence 2:NP_572436.1 Gene:Ldsdh1 / 31726 FlyBaseID:FBgn0029994 Length:320 Species:Drosophila melanogaster


Alignment Length:243 Identity:68/243 - (27%)
Similarity:115/243 - (47%) Gaps:35/243 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVAD 75
            :|:|.::||.|.|:|:|.||.:|:.||.::..|:         :::..:..|.||:..||:|...
  Fly    57 NGKVVLITGTGHGMGKEMALQYAKLGATILCWDV---------NEQTNNQTVKEIKNNGGKAFGY 112

  Fly    76 YNSVIDGAKVIETAIKA---FGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAA 137
            ..:|....::||.|.|.   .|.:.::||||||:....|::.:|.:..|:.::::...|...||.
  Fly   113 VCNVTKREELIELAQKVRKEHGFIHVVVNNAGIMPCHPLLEHTENEIRLMYEINVLSHFWIIQAF 177

  Fly   138 FPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIG----LANTVAIEGARNNVLCNVIVP- 197
            .|.|.::|.|.|:..||.:|::|....|.|...|..:.|    |...:..:..:|||....|.| 
  Fly   178 LPDMIERNEGSIVALSSCAGLFGLINLVPYCGTKFAVRGYMAALVEELRQKNPQNNVKLTTIYPY 242

  Fly   198 ---TAASRMTEGILPDILFNELKPKLIAPVVAYLCHESCEDNGSYIES 242
               |...:......|::.      |||...||         .||.||:
  Fly   243 MIDTGLCKNPRYRFPNLF------KLIPADVA---------AGSIIEA 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mfe2NP_573109.1 hydroxyacyl-CoA-like_DH_SDR_c-like 8..257 CDD:187611 68/243 (28%)
PLN02864 315..598 CDD:178455
Ldsdh1NP_572436.1 Rossmann-fold NAD(P)(+)-binding proteins 60..287 CDD:473865 67/240 (28%)
Blue background indicates that the domain is not in the aligned region.

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