DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat80 and AT1G52360

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001185203.1 Gene:AT1G52360 / 841666 AraportID:AT1G52360 Length:970 Species:Arabidopsis thaliana


Alignment Length:774 Identity:144/774 - (18%)
Similarity:276/774 - (35%) Gaps:162/774 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ISKIYDIKAHDSRVTSLDLGETGRVLVTGGEDRNVNLWAIGQN-ECFMSLTGHNRSIDCVRFAYK 71
            :.|:...:||...:..:.:..|...:::..:|..:.||...:. .|.....||:..:..|.|..|
plant   133 MDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPK 197

  Fly    72 DNFVYSADDIG-IIRRWDLNSQKIYSTLNGHMKSVRTLDFNPSGE--YVVSGSNDTTVRLWDVQN 133
            |...:::..:. .|:.|:|.|.....||:.|.|.|..:|:...|:  |:::||:|.|.::||.|.
plant   198 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT 262

  Fly   134 ENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSKQIMEFIADPPVTAITCVQFH 198
            : :|::...||..:|::|                                          |  ||
plant   263 K-SCVQTLEGHTHNVSAV------------------------------------------C--FH 282

  Fly   199 PFEFLLAAGRVDGTVSIYDLEHQQLVSQTTHFYG-QAIRCITFSDNGECLFVGSSSGISVI--GW 260
            |...::..|..||||.|:.....:|  :.|..|| :.:..|.:..:...:.:|...|..::  |.
plant   283 PELPIIITGSEDGTVRIWHATTYRL--ENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLGR 345

  Fly   261 E-PDRELDHI-KSTWSSLADMKVVNNKLICGCHEIDTVSINTISLDRVIPFYQPPNSLPNFKHNS 323
            | |...:|:. |..|:...:::..|.|.|...:|:.......:|:..:......|.||   |||.
plant   346 EIPVASMDNTGKIIWAKHNEIQTANIKSIGADYEVTDGERLPLSVKELGTCDLYPQSL---KHNP 407

  Fly   324 TNRKSFTRGNQKFRL---------SVGGAKPAQVQEEHEGDKSGLSSPNYSLEVVNEAVLESAET 379
            ..|.....|:.::.:         |.|.........|.|   ..:...:..:::.::...|....
plant   408 NGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGE---CAVRESSSKIKIFSKNFQEKRSI 469

  Fly   380 SPMSSLPPVHLASMAGSSADLAPHHVVYGGAIDSALRQGKYSRVPDNMASYGSS----YGAIDTR 440
            .|..|.                  ..::||.:               :|...|.    |...:.|
plant   470 RPTFSA------------------EKIFGGTL---------------LAMCSSDFICFYDWAECR 501

  Fly   441 LMSLNEPSSLHKPDIYNLYPLDKNE------EADVQQLEFNLNDSNPPILNNYDNYEMAEDFPVN 499
            |:...:.:      :.|||..|..:      :.....|:||    ...:.:::|:....|:..|.
plant   502 LIQRIDVT------VKNLYWADSGDLVAIASDTSFYILKFN----RDLVTSHFDSGRPTEEEGVE 556

  Fly   500 QNLNYITNNYKPVPATSTI-------NASSK---SIKKTTTTTLHKRTTNNMAGAKQTSTGIFGG 554
            .....:..|.:.|.....:       |:|.|   .:....||..|......:.|...:.:.:|..
plant   557 DAFEVLHENDERVRTGIWVGDCFIYNNSSWKLNYCVGGEVTTMYHLDRPMYLLGYLASQSRVFLV 621

  Fly   555 SK----LSQVSSVSSMELHKLDDNMVLKKSSSSNVVNKNKRPMGSAQSQFSKENNQQKNINVEII 615
            .|    :.....:|.:|...|.....|.|  :|.::....:...::.:.|.:.....::. :||.
plant   622 DKEFNVIGYTLLLSLIEYKTLVMRGDLDK--ASEILPTIPKDQHNSVAHFLESRGMIEDA-LEIA 683

  Fly   616 TKPPMRSRTTLDMRTSHQAKTQEKQIHQQQPMNNRIIMDDHDFDMLSRSHEAVLQELSNRQSSLD 680
            |.|..|....:.:.....|  ||..:..|                 |.|....|.||:.....|.
plant   684 TDPDYRFELAIQLGRLEIA--QEIAVEVQ-----------------SESKWKQLGELAMSSGKLQ 729

  Fly   681 LLRHATR-SHDVLGALRQARSCGKSIFIDLLGAILEKPSSWNLDF-CMFVLPEIYELLQ 737
            :.....: :.|:.|.|....|.|.:..:..|..:.::....|:.| |:|:|.::.:.||
plant   730 MAEECMKYAMDLSGLLLLYSSLGDAEGVTKLATLAKEQGKNNVAFLCLFMLGKLEDCLQ 788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636 17/73 (23%)
WD40 <4..330 CDD:225201 73/330 (22%)
WD40 14..260 CDD:238121 54/252 (21%)
WD40 repeat 22..58 CDD:293791 5/36 (14%)
WD40 repeat 63..99 CDD:293791 9/36 (25%)
WD40 repeat 106..142 CDD:293791 11/37 (30%)
WD40 repeat 148..184 CDD:293791 2/35 (6%)
WD40 repeat 192..228 CDD:293791 11/35 (31%)
WD40 repeat 285..310 CDD:293791 4/24 (17%)
AT1G52360NP_001185203.1 WD40 41..518 CDD:225201 91/476 (19%)
WD40 61..341 CDD:238121 55/254 (22%)
WD40 repeat 63..99 CDD:293791
WD40 repeat 147..184 CDD:293791 5/36 (14%)
WD40 repeat 189..226 CDD:293791 9/36 (25%)
WD40 repeat 233..270 CDD:293791 11/37 (30%)
WD40 repeat 276..308 CDD:293791 13/77 (17%)
Coatomer_WDAD 364..808 CDD:281977 83/496 (17%)
WD40 repeat 400..433 CDD:293791 8/35 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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