DRSC/TRiP Functional Genomics Resources

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Protein Alignment kat80 and AT5G24320

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_197820.2 Gene:AT5G24320 / 832502 AraportID:AT5G24320 Length:698 Species:Arabidopsis thaliana


Alignment Length:457 Identity:95/457 - (20%)
Similarity:170/457 - (37%) Gaps:119/457 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KLISKIY---DIKAHDSRVTSLDLGETGRVLVTGGEDRNVNLWAIGQNE-CFMSLTGHN-RSID- 64
            |.:|.::   :|:||:..:.::.....||.|.:.|||..:.:|::.::| |    ..|: ..|| 
plant   236 KELSALFKGQEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERC----EEHDVPKIDP 296

  Fly    65 -CVRF------------AYKDNFVYS-------ADDIGIIRRWDLNSQKIYSTLN-------GHM 102
             |:.|            ..||....|       .:...:|     ...||:..|:       ||.
plant   297 SCIYFEVSKLSELRPVAVEKDGITGSLMSPRKTTESACVI-----IPPKIFRVLDKPLHEFLGHS 356

  Fly   103 KSVRTLDFNPSGEYVVSGSNDTTVRLWDVQNENNCIKVCRGHMSHVNSVKFSP-DGLWIASAGLE 166
            ..:..:.::.:.. ::|.|.|.:||||.:..| :|:.:. .|.::|.||:|:| |.....|..::
plant   357 GDILDISWSKNNR-LLSASVDNSVRLWQIGCE-DCLGIF-SHNNYVTSVQFNPVDDDHFISGSID 418

  Fly   167 GSILIWDIRKSKQIMEFIADPPVTAITCVQFHPFEFLLAAGRVDGTVSIYDLEHQQLVSQTTHFY 231
            |.:.||...:. |::::.....:....|.|            .||...|..     .::....||
plant   419 GKVRIWSASQC-QVVDWADARGIVTAVCYQ------------PDGQAVIIG-----TLTSDCRFY 465

  Fly   232 GQAIRCITFSDNGECLF-VGSSSGISVIGW---------EPDRELDHIKSTWSSLADMKVVNNK- 285
            ..:..|:.. |...||. ...||...:||:         :|.|.:     ..|:.:.:::::.: 
plant   466 NVSGHCLQL-DGHICLHNKKKSSNKRIIGFQFLLQFDSTDPSRVM-----VASADSQVRIISGRN 524

  Fly   286 -------------------------LICGCHEIDTVSINTISLDRVIPFYQPPNSLPNFKHNSTN 325
                                     ::..|.:......|.:..|       |..|.|.|..::..
plant   525 VVHKYKGSRNAGNQISASFTADGKHIVSACDDSSVYVWNCVGHD-------PEQSSPGFFSHTKR 582

  Fly   326 RKSFTRGNQKFRLSVGGAKPAQVQEEHEGDKSGLSSPNYSLEVVNEAVLESAETSPMSSLPPVHL 390
            .|  .|..:||...|..|.|...........|.||...:||.  .|.||:|.:.|  ::.|...|
plant   583 LK--IRSFEKFSADVSVAIPWCGFTPVLSGGSELSPSLFSLG--REYVLDSPKGS--ATWPEEKL 641

  Fly   391 AS 392
            ||
plant   642 AS 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636
WD40 <4..330 CDD:225201 75/393 (19%)
WD40 14..260 CDD:238121 61/277 (22%)
WD40 repeat 22..58 CDD:293791 9/36 (25%)
WD40 repeat 63..99 CDD:293791 10/56 (18%)
WD40 repeat 106..142 CDD:293791 9/35 (26%)
WD40 repeat 148..184 CDD:293791 11/36 (31%)
WD40 repeat 192..228 CDD:293791 5/35 (14%)
WD40 repeat 285..310 CDD:293791 3/50 (6%)
AT5G24320NP_197820.2 WD40 242..629 CDD:225201 87/433 (20%)
WD40 245..563 CDD:295369 66/353 (19%)
WD40 repeat 254..314 CDD:293791 14/63 (22%)
WD40 repeat 320..354 CDD:293791 5/38 (13%)
WD40 repeat 359..393 CDD:293791 9/35 (26%)
WD40 repeat 400..436 CDD:293791 10/36 (28%)
WD40 repeat 441..475 CDD:293791 8/51 (16%)
WD40 repeat 495..531 CDD:293791 3/40 (8%)
WD40 repeat 538..562 CDD:293791 1/23 (4%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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