DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kat80 and AT5G08390

DIOPT Version :9

Sequence 1:NP_523363.2 Gene:kat80 / 32581 FlyBaseID:FBgn0040207 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_568194.2 Gene:AT5G08390 / 830737 AraportID:AT5G08390 Length:839 Species:Arabidopsis thaliana


Alignment Length:878 Identity:232/878 - (26%)
Similarity:387/878 - (44%) Gaps:129/878 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KIYDIKAHDSRVTSLDLG-ETGRVLVTGGEDRNVNLWAIGQNECFMSLTGHNRSIDCVRFAYKDN 73
            |:.:..||.:.|..|.:| ::.|||||||||..|||||||:....:||.||:..||.|.|...:.
plant     8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEG 72

  Fly    74 FVYSADDIGIIRRWDLNSQKIYSTLNGHMKSVRTLDFNPSGEYVVSGSNDTTVRLWDVQNENNCI 138
            .|.:....|.|:.|||...|:..||.||..:..:::|:|.||:..|||.||.:::||:: :..||
plant    73 LVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIR-KKGCI 136

  Fly   139 KVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSKQIMEFIADPPVTAITCVQFHPFEFL 203
            ...:||...||.::|:|||.||.|.|.:..:.:||:...|.:.||.:..  ..|..:.|||.|||
plant   137 HTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHE--GKIQSLDFHPHEFL 199

  Fly   204 LAAGRVDGTVSIYDLEHQQLV----SQTTHFYGQAIRCITFSDNGECLFVGSSSGISVIGWEPDR 264
            ||.|..|.||..:|||..:|:    ::||     .:||:||:.:|:.:..|....:.:..|||.|
plant   200 LATGSADKTVKFWDLETFELIGSGGTETT-----GVRCLTFNPDGKSVLCGLQESLKIFSWEPIR 259

  Fly   265 ELDHIKSTWSSLADMKVVNNKLICGC-HEIDTVSINTISLDRVIPF---YQPPNSLPNFKHNSTN 325
            ..|.:...||:|:||.|...||: || :..:.|.:..:.|.|..|.   ....||.|. |.:.:.
plant   260 CHDGVDVGWSNLSDMNVHEGKLL-GCSYNQNCVGVWVVDLSRTEPMSGGATQSNSHPE-KTSGSG 322

  Fly   326 RKSFTRGNQKFRLSVGGAKPAQ-----VQEEHEGDKSGLSS-----PNYSLEVVNEAVLESA--- 377
            |......:...::.:|....:|     ::|.....|..:|.     |..:......:|.:|:   
plant   323 RDQAGLNDNSSKVILGKLPGSQKVDPLLKETKSLGKLSVSQNSDPLPKDTKSTGRSSVSQSSDPL 387

  Fly   378 --ETSPMSSLPPVHLA---------SMAGSSADLAPHHVVYGGAIDSALRQGKYSRVPDNMASYG 431
              |..|:......|.:         |..||.:| :||.|....|..||   ...|.|..|.|:..
plant   388 VKEPKPLGRFSATHSSDTVKESRTLSSTGSVSD-SPHRVTLTSAPKSA---SGISTVVPNAAASK 448

  Fly   432 SSYGAIDTRLMSLNEPSSLHKPDIYNLY-----PLDKNEEADVQQLEFNLNDSNPPILNNYDNYE 491
            .::|..:.:.    .|..::|.|.:.:.     |:  .|:|...:.|.::.....|    |....
plant   449 RNFGKANPKA----NPPVVNKEDYFPVIVPRTEPI--IEQASESRAELDIIGRTMP----YSLQS 503

  Fly   492 MAEDFPVNQNLNYITNNYKPVPATSTINAS-SKSIKKTTTTTLHKRTT--NNMAGA--------K 545
            .|.|   ::.|: .:.|...:|.:|.:..| |:.|:   ..||....|  ::..|:        |
plant   504 KAAD---SRRLS-SSRNEPDLPTSSLLERSQSQPIE---PITLQDGNTYPSDEGGSWDTAERTNK 561

  Fly   546 QTSTGIFGGSKLSQVSSVSSMELHKLDDNMVL-----KKSSS-----------SNVVNKNKRPMG 594
            ::...:||  :.:..|.|.|...:. |:|..|     .:.||           |.|:|:.:|   
plant   562 ESKCRVFG--RFNSRSLVRSPPRNH-DENSDLISYNANRDSSPTESRKGGRLHSLVLNRERR--- 620

  Fly   595 SAQSQFSKENNQQKNINVEIITKPPMRSRTTLDMRTSHQAKTQEKQIHQQQPMNNRIIM---DDH 656
               .:||.......:.:...:|.|..|....|..|.:|            .|::..|..   :|.
plant   621 ---GRFSNFEGPVSSSSGGNMTAPNSRPSNMLKQRGNH------------VPVDQGITSASEEDI 670

  Fly   657 DFDMLSRSHEAVLQELSNRQSSLDLLRHATRSHDVLGALRQ-ARSCGKSIFIDLLGAILEKPSSW 720
            ..|::.: |:..:..:.:|.:.|.::|.....:|:..::.. .:....::..|:|..:.|:|...
plant   671 VADIMGQ-HDQFVSSMHSRLAKLQVVRRYWERNDIKNSISSIEKMADNAVIADVLLIVNERPEIL 734

  Fly   721 NLDFCMFVLPEIYELLQSQHKFHFTRACDTLRIILSNFLPTIQENLDSWAANGLGVDVTREDRQR 785
            .||.|..:||.:..||.|....|.:...|.|..::..:...|..:|.  |.:.:|||:..|.|..
plant   735 TLDTCTSLLPLLTALLGSNMDSHLSVCLDLLLKLVRMYGSQIYSSLS--APSSVGVDIEAEQRME 797

  Fly   786 KCAECQRWLLQIKN-LPESTHFGS----TLSQL 813
            :.:.|.....:||. ||.....|:    ||.:|
plant   798 RYSCCFVEFEKIKACLPSLARRGNLVAKTLHEL 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kat80NP_523363.2 Katanin_con80 667..803 CDD:290636 32/137 (23%)
WD40 <4..330 CDD:225201 120/328 (37%)
WD40 14..260 CDD:238121 95/250 (38%)
WD40 repeat 22..58 CDD:293791 20/36 (56%)
WD40 repeat 63..99 CDD:293791 12/35 (34%)
WD40 repeat 106..142 CDD:293791 13/35 (37%)
WD40 repeat 148..184 CDD:293791 14/35 (40%)
WD40 repeat 192..228 CDD:293791 17/39 (44%)
WD40 repeat 285..310 CDD:293791 8/28 (29%)
AT5G08390NP_568194.2 WD40 9..261 CDD:238121 99/259 (38%)
WD40 repeat 63..99 CDD:293791 12/35 (34%)
WD40 repeat 104..140 CDD:293791 13/36 (36%)
WD40 repeat 147..182 CDD:293791 13/34 (38%)
WD40 repeat 188..222 CDD:293791 17/33 (52%)
Katanin_con80 680..831 CDD:404758 36/153 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 77 1.000 Domainoid score I3090
eggNOG 1 0.900 - - E1_KOG0267
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4302
Inparanoid 1 1.050 271 1.000 Inparanoid score I915
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D425951at2759
OrthoFinder 1 1.000 - - FOG0006599
OrthoInspector 1 1.000 - - otm2740
orthoMCL 1 0.900 - - OOG6_103099
Panther 1 1.100 - - O PTHR19845
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3736
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.830

Return to query results.
Submit another query.