| Sequence 1: | NP_523363.2 | Gene: | kat80 / 32581 | FlyBaseID: | FBgn0040207 | Length: | 819 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_112408.1 | Gene: | Arpc1a / 81824 | RGDID: | 620834 | Length: | 370 | Species: | Rattus norvegicus |
| Alignment Length: | 339 | Identity: | 68/339 - (20%) |
|---|---|---|---|
| Similarity: | 133/339 - (39%) | Gaps: | 76/339 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 9 SKIYDIKAHDSRVTSLDLGETGRVLVTGGEDRNVNLWAIGQNECF----MSLTGHNRSIDCVRFA 69
Fly 70 YKDNFVYSADDIGIIRRWDLNSQKIYSTLNGHMK-----SVRTLDFNPSGEYVVSGSNDTTVRLW 129
Fly 130 DVQNENNCIKVC-------------------RGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIR 175
Fly 176 KSKQI----MEFIADPPVTAITCVQFHPFEFLLAAG--------RVDGT-----VSIYDLEHQQL 223
Fly 224 ---VSQTTHFYGQAIRCITFSDNG--ECLFVGSSSGISVIGWEPDRE---------LDHIKSTW- 273
Fly 274 -----SSLADMKVV 282 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| kat80 | NP_523363.2 | Katanin_con80 | 667..803 | CDD:290636 | |
| WD40 | <4..330 | CDD:225201 | 68/339 (20%) | ||
| WD40 | 14..260 | CDD:238121 | 61/295 (21%) | ||
| WD40 repeat | 22..58 | CDD:293791 | 10/39 (26%) | ||
| WD40 repeat | 63..99 | CDD:293791 | 4/35 (11%) | ||
| WD40 repeat | 106..142 | CDD:293791 | 8/54 (15%) | ||
| WD40 repeat | 148..184 | CDD:293791 | 11/39 (28%) | ||
| WD40 repeat | 192..228 | CDD:293791 | 10/51 (20%) | ||
| WD40 repeat | 285..310 | CDD:293791 | |||
| Arpc1a | NP_112408.1 | WD 1 | 6..45 | 0/1 (0%) | |
| WD40 repeat | 11..50 | CDD:293791 | 1/6 (17%) | ||
| WD40 | 46..>280 | CDD:421866 | 48/242 (20%) | ||
| WD 2 | 50..89 | 11/40 (28%) | |||
| WD40 repeat | 56..93 | CDD:293791 | 10/38 (26%) | ||
| WD40 repeat | 98..138 | CDD:293791 | 5/40 (13%) | ||
| WD 3 | 140..179 | 8/38 (21%) | |||
| WD40 repeat | 146..199 | CDD:293791 | 8/52 (15%) | ||
| WD 4 | 202..241 | 11/38 (29%) | |||
| WD40 repeat | 207..243 | CDD:293791 | 10/35 (29%) | ||
| WD 5 | 244..284 | 8/45 (18%) | |||
| WD40 repeat | 249..287 | CDD:293791 | 7/40 (18%) | ||
| WD 6 | 322..365 | 9/44 (20%) | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||